Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24887846-24977847

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spsb3 17 24886643 to 24892152 5509 + protein coding gene splA/ryanodine receptor domain and SOCS box containing 3
Tssr143112 17 24891357 to 24891362 5 + TSS region transcription start site region 143112
Eme2 17 24892152 to 24895087 2935 - protein coding gene essential meiotic structure-specific endonuclease subunit 2
Cpgi8748 17 24894529 to 24897291 2762 CpG island CpG island 8748
Tssr146794 17 24895047 to 24895077 30 - TSS region transcription start site region 146794
Tssr143113 17 24895117 to 24895167 50 + TSS region transcription start site region 143113
Mrps34 17 24895120 to 24896274 1154 + protein coding gene mitochondrial ribosomal protein S34
Tssr146795 17 24895460 to 24895485 25 - TSS region transcription start site region 146795
Tssr143114 17 24895519 to 24895542 23 + TSS region transcription start site region 143114
Tssr143115 17 24896488 to 24896530 42 + TSS region transcription start site region 143115
Nme3 17 24896500 to 24897522 1022 + protein coding gene NME/NM23 nucleoside diphosphate kinase 3
Tssr143116 17 24896535 to 24896549 14 + TSS region transcription start site region 143116
Tssr143117 17 24896609 to 24896628 19 + TSS region transcription start site region 143117
Mapk8ip3 17 24897506 to 24936977 39471 - protein coding gene mitogen-activated protein kinase 8 interacting protein 3
D17Jcs40 17 24928286 to 24928484 198 DNA segment DNA segment, Chr 17, John C. Schimenti 40
Del(17D17Jcs40-D17Mit198)7Jcs 17 24928286 to 27659245 2730959 chromosomal deletion deletion, Chr 17, John C Schimenti 7
Tssr143118 17 24932846 to 24932847 1 + TSS region transcription start site region 143118
Cpgi8749 17 24936290 to 24937274 984 CpG island CpG island 8749
Tssr146796 17 24936930 to 24936967 37 - TSS region transcription start site region 146796
Tssr146797 17 24936969 to 24937002 33 - TSS region transcription start site region 146797
Jpt2 17 24942470 to 24960623 18153 - protein coding gene Jupiter microtubule associated homolog 2
Tssr146798 17 24943189 to 24943231 42 - TSS region transcription start site region 146798
Tssr146799 17 24943234 to 24943247 13 - TSS region transcription start site region 146799
Cpgi8750 17 24960146 to 24961207 1061 CpG island CpG island 8750
Tssr146800 17 24960598 to 24960614 16 - TSS region transcription start site region 146800
Tssr146801 17 24960620 to 24960654 34 - TSS region transcription start site region 146801
Tssr146802 17 24960661 to 24960693 32 - TSS region transcription start site region 146802
Cramp1l 17 24961226 to 25015788 54562 - protein coding gene cramped chromatin regulator homolog 1