Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:24206320-24426324

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49 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ntn3 17 24203831 to 24209387 5556 - protein coding gene netrin 3
Cpgi8711 17 24204893 to 24207641 2748 CpG island CpG island 8711
Cpgi8712 17 24208502 to 24209632 1130 CpG island CpG island 8712
BC028777 17 24208861 to 24221730 12869 + unclassified non-coding RNA gene cDNA sequence BC028777
Tssr146716 17 24209377 to 24209416 39 - TSS region transcription start site region 146716
Cpgi8713 17 24211898 to 24212459 561 CpG island CpG island 8713
Tedc2 17 24215054 to 24220851 5797 - protein coding gene tubulin epsilon and delta complex 2
Cpgi8714 17 24220405 to 24220918 513 CpG island CpG island 8714
Tssr146717 17 24220617 to 24220641 24 - TSS region transcription start site region 146717
Tssr146718 17 24220695 to 24220704 9 - TSS region transcription start site region 146718
Tssr146719 17 24220708 to 24220737 29 - TSS region transcription start site region 146719
Tssr146720 17 24220738 to 24220803 65 - TSS region transcription start site region 146720
Ccnf 17 24223230 to 24251409 28179 - protein coding gene cyclin F
Tssr146721 17 24223987 to 24223995 8 - TSS region transcription start site region 146721
Mir5134 17 24234527 to 24234604 77 - miRNA gene microRNA 5134
Mir6965 17 24240884 to 24240947 63 - miRNA gene microRNA 6965
Cpgi8715 17 24250958 to 24251950 992 CpG island CpG island 8715
Tssr146722 17 24251322 to 24251381 59 - TSS region transcription start site region 146722
Tssr146723 17 24251382 to 24251397 15 - TSS region transcription start site region 146723
Tssr143017 17 24251660 to 24251679 19 + TSS region transcription start site region 143017
Tssr143018 17 24251964 to 24252010 46 + TSS region transcription start site region 143018
Tssr143019 17 24252584 to 24252589 5 + TSS region transcription start site region 143019
Abca17 17 24264259 to 24351068 86809 - protein coding gene ATP-binding cassette, sub-family A (ABC1), member 17
Tssr143020 17 24273997 to 24274001 4 + TSS region transcription start site region 143020
Gm24427 17 24304669 to 24304789 120 + miRNA gene predicted gene, 24427
Tssr146724 17 24316320 to 24316324 4 - TSS region transcription start site region 146724
D17Jcs14 17 24348701 to 24348935 234 DNA segment DNA segment, Chr 17, John C. Schimenti 14
Cpgi8716 17 24350823 to 24352855 2032 CpG island CpG island 8716
Tssr146725 17 24351053 to 24351064 11 - TSS region transcription start site region 146725
Tssr146726 17 24351072 to 24351108 36 - TSS region transcription start site region 146726
Tssr143021 17 24351937 to 24351948 11 + TSS region transcription start site region 143021
Tssr143022 17 24351954 to 24351968 14 + TSS region transcription start site region 143022
Tssr143023 17 24352017 to 24352028 11 + TSS region transcription start site region 143023
Abca3 17 24352023 to 24410204 58181 + protein coding gene ATP-binding cassette, sub-family A (ABC1), member 3
Tssr143024 17 24352037 to 24352149 112 + TSS region transcription start site region 143024
Gm25618 17 24362438 to 24362544 106 - snRNA gene predicted gene, 25618
D17Lon5 17 24378174 to 24378306 132 DNA segment DNA segment, Chr 17, London 5
Tssr143025 17 24398607 to 24398611 4 + TSS region transcription start site region 143025
D330041H03Rik 17 24409481 to 24414513 5032 - lncRNA gene RIKEN cDNA D330041H03 gene
Cpgi8717 17 24413760 to 24415433 1673 CpG island CpG island 8717
Tssr146727 17 24414397 to 24414451 54 - TSS region transcription start site region 146727
Tssr146728 17 24414470 to 24414484 14 - TSS region transcription start site region 146728
Tssr143026 17 24414640 to 24414691 51 + TSS region transcription start site region 143026
Rnps1 17 24414642 to 24425898 11256 + protein coding gene ribonucleic acid binding protein S1
Tssr143027 17 24414913 to 24414985 72 + TSS region transcription start site region 143027
Tssr146729 17 24415524 to 24415534 10 - TSS region transcription start site region 146729
Tssr143028 17 24419463 to 24419467 4 + TSS region transcription start site region 143028
Tssr143029 17 24424470 to 24424476 6 + TSS region transcription start site region 143029
Tssr143030 17 24425491 to 24425526 35 + TSS region transcription start site region 143030