MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 17:23535715-23566100

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm41543	17	23537670 to 23538674	1004	-	lncRNA gene	predicted gene, 41543
Cpgi8668	17	23537840 to 23538270	430		CpG island	CpG island 8668
n-TPtgg1	17	23538766 to 23538837	71	-	tRNA gene	nuclear encoded tRNA proline 1 (anticodon TGG)
n-TPcgg1	17	23540915 to 23540986	71	+	tRNA gene	nuclear encoded tRNA proline 1 (anticodon CGG)
Cpgi8669	17	23546420 to 23547285	865		CpG island	CpG island 8669
n-TPtgg6	17	23546476 to 23546547	71	-	tRNA gene	nuclear encoded tRNA proline 6 (anticodon TGG)
n-TKctt14	17	23547360 to 23547432	72	+	tRNA gene	nuclear encoded tRNA lysine 14 (anticodon CTT)
n-TRcct2	17	23548768 to 23548840	72	-	tRNA gene	nuclear encoded tRNA arginine 2 (anticodon CCT)
Cpgi8670	17	23548841 to 23549111	270		CpG island	CpG island 8670
n-TRccg2	17	23550263 to 23550335	72	-	tRNA gene	nuclear encoded tRNA arginine 2 (anticodon CCG)
Cpgi8671	17	23550715 to 23551100	385		CpG island	CpG island 8671
6330415G19Rik	17	23550799 to 23565291	14492	+	antisense lncRNA gene	RIKEN cDNA 6330415G19 gene
Casp16	17	23551080 to 23555330	4250	-	polymorphic pseudogene	caspase 16, apoptosis-related cysteine peptidase
Zfp213	17	23556767 to 23564226	7459	-	protein coding gene	zinc finger protein 213
Gm26695	17	23556769 to 23558313	1544	+	lincRNA gene	predicted gene, 26695
Cpgi8672	17	23563741 to 23564614	873		CpG island	CpG island 8672
Tssr146614	17	23564117 to 23564161	44	-	TSS region	transcription start site region 146614
Tssr142923	17	23564269 to 23564299	30	+	TSS region	transcription start site region 142923