Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 17:21497741-21935636

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp53 17 21488998 to 21510473 21475 + protein coding gene zinc finger protein 53
Tssr142884 17 21503815 to 21503818 3 + TSS region transcription start site region 142884
Cpgi8656 17 21516603 to 21516978 375 CpG island CpG island 8656
Tssr146592 17 21516939 to 21516960 21 - TSS region transcription start site region 146592
Tssr142885 17 21516998 to 21517018 20 + TSS region transcription start site region 142885
9330136K24Rik 17 21528196 to 21535878 7682 - lincRNA gene RIKEN cDNA 9330136K24 gene
Cpgi8657 17 21532232 to 21532892 660 CpG island CpG island 8657
Tssr5028 17 21535450 to 21535511 61 - TSS region transcription start site region 5028
Tssr142886 17 21535530 to 21535545 15 + TSS region transcription start site region 142886
Zfp52 17 21535539 to 21562601 27062 + protein coding gene zinc finger protein 52
Tssr142887 17 21535547 to 21535571 24 + TSS region transcription start site region 142887
Tssr142888 17 21535572 to 21535589 17 + TSS region transcription start site region 142888
Tssr142889 17 21535593 to 21535628 35 + TSS region transcription start site region 142889
Tssr142890 17 21535634 to 21535661 27 + TSS region transcription start site region 142890
Tssr142891 17 21537082 to 21537095 13 + TSS region transcription start site region 142891
Cpgi8658 17 21566930 to 21567292 362 CpG island CpG island 8658
Tssr142892 17 21566988 to 21567043 55 + TSS region transcription start site region 142892
Zfp948 17 21567008 to 21588699 21691 + protein coding gene zinc finger protein 948
Tssr142893 17 21567056 to 21567067 11 + TSS region transcription start site region 142893
Tssr142894 17 21567419 to 21567424 5 + TSS region transcription start site region 142894
Tssr142895 17 21573839 to 21573843 4 + TSS region transcription start site region 142895
Gm49954 17 21613612 to 21613822 210 + pseudogene predicted gene, 49954
Gm41541 17 21619792 to 21624989 5197 - lincRNA gene predicted gene, 41541
Gm30531 17 21629252 to 21635227 5975 + pseudogene predicted gene, 30531
Tssr146593 17 21650436 to 21650468 32 - TSS region transcription start site region 146593
Cpgi8659 17 21650522 to 21650823 301 CpG island CpG island 8659
Zfp983 17 21650624 to 21664966 14342 + protein coding gene zinc finger protein 983
D17Jcs131 17 21658367 to 21658531 164 DNA segment DNA segment, Chr 17, John C. Schimenti 131
Gm10509 17 21690180 to 21691022 842 + pseudogene predicted gene 10509
Gm10226 17 21691860 to 21692114 254 + protein coding gene predicted gene 10226
Cpgi8660 17 21707609 to 21707953 344 CpG island CpG island 8660
Tssr142896 17 21707682 to 21707741 59 + TSS region transcription start site region 142896
Zfp760 17 21707741 to 21725636 17895 + protein coding gene zinc finger protein 760
Tssr142897 17 21707742 to 21707765 23 + TSS region transcription start site region 142897
Tssr142898 17 21707770 to 21707799 29 + TSS region transcription start site region 142898
Tssr142899 17 21733704 to 21733722 18 + TSS region transcription start site region 142899
Zfp229 17 21733724 to 21748969 15245 + protein coding gene zinc finger protein 229
Tssr142900 17 21733727 to 21733749 22 + TSS region transcription start site region 142900
Cpgi8661 17 21733839 to 21734052 213 CpG island CpG island 8661
D17Jcs132 17 21782377 to 21782625 248 DNA segment DNA segment, Chr 17, John C. Schimenti 132
Gm18270 17 21787895 to 21789331 1436 + pseudogene predicted gene, 18270
4930515G13Rik 17 21801159 to 21801658 499 - pseudogene RIKEN cDNA 4930515G13 gene
Gm9818 17 21808186 to 21808444 258 + pseudogene predicted gene 9818
Zfp820 17 21816876 to 21845759 28883 - protein coding gene zinc finger protein 820
Gm31758 17 21823906 to 21865293 41387 + lncRNA gene predicted gene, 31758
Cpgi8662 17 21845599 to 21845766 167 CpG island CpG island 8662
Zfp995 17 21879570 to 21909926 30356 - protein coding gene zinc finger protein 995
Cpgi8663 17 21909492 to 21909658 166 CpG island CpG island 8663
Tssr146594 17 21909619 to 21909677 58 - TSS region transcription start site region 146594
Gm6540 17 21920204 to 21921172 968 - pseudogene predicted gene 6540
Cpgi8664 17 21920987 to 21921277 290 CpG island CpG island 8664
Tssr146595 17 21921295 to 21921296 1 - TSS region transcription start site region 146595
Zfp942 17 21926963 to 21962464 35501 - protein coding gene zinc finger protein 942