MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:94447463-94557470

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16 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ttc3	16	94370620 to 94469222	98602	+	protein coding gene	tetratricopeptide repeat domain 3
Tssr139550	16	94448108 to 94448119	11	+	TSS region	transcription start site region 139550
Tssr139551	16	94454411 to 94454452	41	+	TSS region	transcription start site region 139551
Tssr139552	16	94454472 to 94454484	12	+	TSS region	transcription start site region 139552
Tssr139553	16	94459953 to 94459966	13	+	TSS region	transcription start site region 139553
Tssr139554	16	94468497 to 94468501	4	+	TSS region	transcription start site region 139554
Gm31323	16	94488777 to 94522117	33340	+	antisense lncRNA gene	predicted gene, 31323
Vps26c	16	94497724 to 94526629	28905	-	protein coding gene	VPS26 endosomal protein sorting factor C
Tssr142231	16	94498647 to 94498677	30	-	TSS region	transcription start site region 142231
Tssr139555	16	94502463 to 94502470	7	+	TSS region	transcription start site region 139555
4930586H24Rik	16	94521597 to 94522308	711		unclassified gene	RIKEN cDNA 4930586H24 gene
Cpgi8503	16	94525944 to 94527331	1387		CpG island	CpG island 8503
Tssr142232	16	94526396 to 94526451	55	-	TSS region	transcription start site region 142232
Tssr142233	16	94526830 to 94526839	9	-	TSS region	transcription start site region 142233
Tssr139556	16	94527037 to 94527094	57	+	TSS region	transcription start site region 139556
Tssr139557	16	94552210 to 94552224	14	+	TSS region	transcription start site region 139557