Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:94370776-94770802

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pigp 16 94358763 to 94371015 12252 - protein coding gene phosphatidylinositol glycan anchor biosynthesis, class P
Cpgi8502 16 94370085 to 94371834 1749 CpG island CpG island 8502
Ttc3 16 94370620 to 94469222 98602 + protein coding gene tetratricopeptide repeat domain 3
Tssr139543 16 94370731 to 94370784 53 + TSS region transcription start site region 139543
Tssr139544 16 94370786 to 94370807 21 + TSS region transcription start site region 139544
Tssr142228 16 94370967 to 94370990 23 - TSS region transcription start site region 142228
Tssr142229 16 94370994 to 94371019 25 - TSS region transcription start site region 142229
Tssr142230 16 94371832 to 94371848 16 - TSS region transcription start site region 142230
D16Jhu37 16 94374912 to 94375134 222 DNA segment DNA segment, Chr 16, Johns Hopkins University 37
Tssr139545 16 94410823 to 94410861 38 + TSS region transcription start site region 139545
Tssr139546 16 94420301 to 94420320 19 + TSS region transcription start site region 139546
Tssr139547 16 94425083 to 94425107 24 + TSS region transcription start site region 139547
Tssr139548 16 94426184 to 94426197 13 + TSS region transcription start site region 139548
Gm23692 16 94429073 to 94429232 159 + snRNA gene predicted gene, 23692
Tssr139549 16 94442581 to 94442599 18 + TSS region transcription start site region 139549
Tssr139550 16 94448108 to 94448119 11 + TSS region transcription start site region 139550
Tssr139551 16 94454411 to 94454452 41 + TSS region transcription start site region 139551
Tssr139552 16 94454472 to 94454484 12 + TSS region transcription start site region 139552
Tssr139553 16 94459953 to 94459966 13 + TSS region transcription start site region 139553
Tssr139554 16 94468497 to 94468501 4 + TSS region transcription start site region 139554
Gm31323 16 94488777 to 94522117 33340 + antisense lncRNA gene predicted gene, 31323
Vps26c 16 94497724 to 94526629 28905 - protein coding gene VPS26 endosomal protein sorting factor C
Tssr142231 16 94498647 to 94498677 30 - TSS region transcription start site region 142231
Tssr139555 16 94502463 to 94502470 7 + TSS region transcription start site region 139555
4930586H24Rik 16 94521597 to 94522308 711 unclassified gene RIKEN cDNA 4930586H24 gene
Cpgi8503 16 94525944 to 94527331 1387 CpG island CpG island 8503
Tssr142232 16 94526396 to 94526451 55 - TSS region transcription start site region 142232
Tssr142233 16 94526830 to 94526839 9 - TSS region transcription start site region 142233
Tssr139556 16 94527037 to 94527094 57 + TSS region transcription start site region 139556
Tssr139557 16 94552210 to 94552224 14 + TSS region transcription start site region 139557
Cpgi8504 16 94568868 to 94571124 2256 CpG island CpG island 8504
Tssr139558 16 94569651 to 94569713 62 + TSS region transcription start site region 139558
Tssr139559 16 94569716 to 94569769 53 + TSS region transcription start site region 139559
Tssr139560 16 94569774 to 94569787 13 + TSS region transcription start site region 139560
Tssr139561 16 94569806 to 94569831 25 + TSS region transcription start site region 139561
Tssr139562 16 94569905 to 94569953 48 + TSS region transcription start site region 139562
Dyrk1a 16 94570010 to 94695517 125507 + protein coding gene dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1a
Tssr139563 16 94570012 to 94570052 40 + TSS region transcription start site region 139563
Tssr142234 16 94570756 to 94570771 15 - TSS region transcription start site region 142234
Tssr142235 16 94570776 to 94570802 26 - TSS region transcription start site region 142235
Tssr142236 16 94571117 to 94571141 24 - TSS region transcription start site region 142236
Gm15971 16 94620377 to 94620587 210 + pseudogene predicted gene 15971
Tssr139564 16 94629710 to 94629713 3 + TSS region transcription start site region 139564
Tssr139565 16 94694212 to 94694251 39 + TSS region transcription start site region 139565
Gm41504 16 94712559 to 94713903 1344 - lncRNA gene predicted gene, 41504
Cpgi8505 16 94713600 to 94714111 511 CpG island CpG island 8505
Tssr139566 16 94721880 to 94721900 20 + TSS region transcription start site region 139566
Tssr139567 16 94721955 to 94721968 13 + TSS region transcription start site region 139567
Tssr139568 16 94721980 to 94721991 11 + TSS region transcription start site region 139568
Gm41507 16 94723328 to 94725397 2069 - lncRNA gene predicted gene, 41507
Cpgi8506 16 94724201 to 94725276 1075 CpG island CpG island 8506
Tssr139569 16 94724486 to 94724505 19 + TSS region transcription start site region 139569
Tssr139570 16 94732125 to 94732127 2 + TSS region transcription start site region 139570
Kcnj6 16 94748683 to 94997696 249013 - protein coding gene potassium inwardly-rectifying channel, subfamily J, member 6
6530402D11Rik 16 94749774 to 94751034 1260 protein coding gene RIKEN cDNA 6530402D11 gene
Gm41505 16 94752728 to 94753436 708 + antisense lncRNA gene predicted gene, 41505
Tssr4968 16 94760925 to 94760926 1 - TSS region transcription start site region 4968