Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:94123882-94318571

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sim2 16 94085191 to 94127032 41841 + protein coding gene single-minded family bHLH transcription factor 2
Cpgi8496 16 94125077 to 94126169 1092 CpG island CpG island 8496
Hlcs 16 94128882 to 94313571 184689 - protein coding gene holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
Gm23062 16 94169302 to 94169411 109 - miRNA gene predicted gene, 23062
Gm48979 16 94169326 to 94169659 333 - pseudogene predicted gene, 48979
Gm48984 16 94174541 to 94179198 4657 + antisense lncRNA gene predicted gene, 48984
Cpgi8497 16 94185504 to 94185666 162 CpG island CpG island 8497
Gm48978 16 94218021 to 94223012 4991 - unclassified gene predicted gene, 48978
Tssr142218 16 94222989 to 94222993 4 - TSS region transcription start site region 142218
Tssr142219 16 94223148 to 94223159 11 - TSS region transcription start site region 142219
Gm6363 16 94242274 to 94243347 1073 - pseudogene predicted gene 6363
Tssr142220 16 94246067 to 94246082 15 - TSS region transcription start site region 142220
D16Jhu35 16 94270637 to 94270782 145 DNA segment DNA segment, Chr 16, Johns Hopkins University 35
Cpgi8498 16 94289664 to 94290775 1111 CpG island CpG island 8498
Tssr142221 16 94290242 to 94290296 54 - TSS region transcription start site region 142221
Tssr142222 16 94291009 to 94291015 6 - TSS region transcription start site region 142222
Cpgi8499 16 94302875 to 94303225 350 CpG island CpG island 8499
Cpgi8500 16 94312753 to 94313925 1172 CpG island CpG island 8500
Tssr142223 16 94313556 to 94313577 21 - TSS region transcription start site region 142223
Tssr142224 16 94317879 to 94317919 40 - TSS region transcription start site region 142224