MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:87383407-87490573

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ltn1	16	87376651 to 87432612	55961	-	protein coding gene	listerin E3 ubiquitin protein ligase 1
Gm25896	16	87418909 to 87419044	135	-	snoRNA gene	predicted gene, 25896
Cpgi8395	16	87431953 to 87432785	832		CpG island	CpG island 8395
Tssr141933	16	87432484 to 87432548	64	-	TSS region	transcription start site region 141933
Tssr141934	16	87432597 to 87432613	16	-	TSS region	transcription start site region 141934
Rwdd2b	16	87433407 to 87440573	7166	-	protein coding gene	RWD domain containing 2B
Cpgi8396	16	87437106 to 87437368	262		CpG island	CpG island 8396
Cpgi8397	16	87440136 to 87440761	625		CpG island	CpG island 8397
Tssr141935	16	87440498 to 87440542	44	-	TSS region	transcription start site region 141935
Tssr141936	16	87440551 to 87440612	61	-	TSS region	transcription start site region 141936
Tssr139218	16	87440602 to 87440637	35	+	TSS region	transcription start site region 139218
Tssr141937	16	87443216 to 87443220	4	-	TSS region	transcription start site region 141937
Usp16	16	87454708 to 87483515	28807	+	protein coding gene	ubiquitin specific peptidase 16
Cpgi8398	16	87454750 to 87455689	939		CpG island	CpG island 8398
Tssr139219	16	87454976 to 87454987	11	+	TSS region	transcription start site region 139219
Tssr139220	16	87454992 to 87455057	65	+	TSS region	transcription start site region 139220
Cct8	16	87483325 to 87495869	12544	-	protein coding gene	chaperonin containing Tcp1, subunit 8 (theta)
Tssr141938	16	87490546 to 87490576	30	-	TSS region	transcription start site region 141938