MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:7393736-8024066

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13 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rbfox1	16	5885355 to 7411526	1526171	+	protein coding gene	RNA binding protein, fox-1 homolog (C. elegans) 1
Tssr136988	16	7409781 to 7409794	13	+	TSS region	transcription start site region 136988
D16Mit122	16	7445880 to 7445989	109		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 122
Heal11	16	7445880 to 7445989	109		QTL	wound healing/regeneration 11
Nhdlq10	16	7445880 to 7445989	109		QTL	non-HDL QTL 10
Gm49533	16	7708736 to 7709066	330	-	pseudogene	predicted gene, 49533
Tssr4787	16	7767870 to 7767879	9	+	TSS region	transcription start site region 4787
Gm29854	16	7767891 to 7771595	3704	+	lncRNA gene	predicted gene, 29854
Tssr136989	16	7828205 to 7828208	3	+	TSS region	transcription start site region 136989
Gm49534	16	7870102 to 7879859	9757	+	lincRNA gene	predicted gene, 49534
Tssr139854	16	7951666 to 7951676	10	-	TSS region	transcription start site region 139854
D16Mit142	16	7983236 to 7983378	142		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 142
Dice1a	16	11139842 to 7983236	-3156606		QTL	determination of interleukin 4 commitment 1a