Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:58523686-58706978

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
St3gal6 16 58469742 to 58524253 54511 - protein coding gene ST3 beta-galactoside alpha-2,3-sialyltransferase 6
Cpgi8342 16 58522703 to 58523711 1008 CpG island CpG island 8342
Tssr141630 16 58523716 to 58523730 14 - TSS region transcription start site region 141630
Tssr141631 16 58523758 to 58523810 52 - TSS region transcription start site region 141631
Tssr141632 16 58524164 to 58524179 15 - TSS region transcription start site region 141632
Tssr141633 16 58524187 to 58524198 11 - TSS region transcription start site region 141633
Tssr141634 16 58524214 to 58524227 13 - TSS region transcription start site region 141634
Tssr141635 16 58524239 to 58524249 10 - TSS region transcription start site region 141635
Gm20942 16 58555117 to 58555705 588 - pseudogene predicted gene, 20942
Tssr141636 16 58555749 to 58555752 3 - TSS region transcription start site region 141636
Gm813 16 58613686 to 58616978 3292 - protein coding gene predicted gene 813
Tssr141637 16 58616973 to 58616979 6 - TSS region transcription start site region 141637
Tssr138858 16 58622617 to 58622632 15 + TSS region transcription start site region 138858
E330017A01Rik 16 58635262 to 58638403 3141 - protein coding gene RIKEN cDNA E330017A01 gene
Tssr141638 16 58638391 to 58638410 19 - TSS region transcription start site region 141638
Gm49701 16 58651490 to 58655244 3754 - lincRNA gene predicted gene, 49701
Gm41464 16 58657478 to 58662146 4668 - lncRNA gene predicted gene, 41464
Tssr138859 16 58662094 to 58662112 18 + TSS region transcription start site region 138859
Cpgi8343 16 58669953 to 58670996 1043 CpG island CpG island 8343
Tssr138860 16 58670050 to 58670090 40 + TSS region transcription start site region 138860
Cpox 16 58670208 to 58680391 10183 + protein coding gene coproporphyrinogen oxidase
Tssr138861 16 58670235 to 58670246 11 + TSS region transcription start site region 138861
Tssr138862 16 58670262 to 58670362 100 + TSS region transcription start site region 138862
Tssr138863 16 58670367 to 58670374 7 + TSS region transcription start site region 138863
Tssr138864 16 58670506 to 58670555 49 + TSS region transcription start site region 138864
Tssr138865 16 58670741 to 58670764 23 + TSS region transcription start site region 138865
Tssr138866 16 58677785 to 58677825 40 + TSS region transcription start site region 138866
Tssr138867 16 58677833 to 58677844 11 + TSS region transcription start site region 138867
Tssr138868 16 58679702 to 58679723 21 + TSS region transcription start site region 138868