MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:56846703-57117837

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tmem45a	16	56805161 to 56886166	81005	-	protein coding gene	transmembrane protein 45a
Tssr141571	16	56867661 to 56867670	9	-	TSS region	transcription start site region 141571
Tssr141572	16	56885923 to 56885932	9	-	TSS region	transcription start site region 141572
Tssr141573	16	56885955 to 56885968	13	-	TSS region	transcription start site region 141573
Tssr141574	16	56885978 to 56885989	11	-	TSS region	transcription start site region 141574
Tssr141575	16	56886016 to 56886026	10	-	TSS region	transcription start site region 141575
Tssr141576	16	56886093 to 56886125	32	-	TSS region	transcription start site region 141576
Tssr141577	16	56886131 to 56886176	45	-	TSS region	transcription start site region 141577
Cpgi8331	16	56886176 to 56886401	225		CpG island	CpG island 8331
Gm15839	16	56886367 to 56921506	35139	+	antisense lncRNA gene	predicted gene 15839
Gm15840	16	56909111 to 56910053	942	-	pseudogene	predicted gene 15840
Gm8932	16	56909295 to 56909926	631	+	pseudogene	predicted gene 8932
Lnp1	16	56914344 to 56928061	13717	-	protein coding gene	leukemia NUP98 fusion partner 1
Tssr141578	16	56928089 to 56928127	38	-	TSS region	transcription start site region 141578
Gm8938	16	56981703 to 56982837	1134	+	pseudogene	predicted gene 8938
Tmem45a2	16	57036967 to 57071372	34405	-	protein coding gene	transmembrane protein 45A2
Tssr141579	16	57071227 to 57071237	10	-	TSS region	transcription start site region 141579
Tssr141580	16	57071348 to 57071388	40	-	TSS region	transcription start site region 141580