Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:56002403-56252439

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zbtb11 16 55973883 to 56008913 35030 + protein coding gene zinc finger and BTB domain containing 11
Pcnp 16 56015507 to 56030175 14668 - protein coding gene PEST proteolytic signal containing nuclear protein
Tssr141549 16 56017041 to 56017050 9 - TSS region transcription start site region 141549
Tssr141550 16 56021260 to 56021264 4 - TSS region transcription start site region 141550
Cpgi8326 16 56028961 to 56030156 1195 CpG island CpG island 8326
Tssr141551 16 56029666 to 56029720 54 - TSS region transcription start site region 141551
Trmt10c 16 56033720 to 56037774 4054 - protein coding gene tRNA methyltransferase 10C, mitochondrial RNase P subunit
Gm22422 16 56035753 to 56035887 134 - snoRNA gene predicted gene, 22422
Cpgi8327 16 56037380 to 56038158 778 CpG island CpG island 8327
Tssr141552 16 56037728 to 56037810 82 - TSS region transcription start site region 141552
Senp7 16 56057530 to 56190031 132501 + protein coding gene SUMO1/sentrin specific peptidase 7
Cpgi8328 16 56064101 to 56064782 681 CpG island CpG island 8328
Gm41462 16 56067819 to 56069664 1845 - lncRNA gene predicted gene, 41462
Gm24047 16 56070563 to 56070666 103 + miRNA gene predicted gene, 24047
Cpgi8329 16 56075393 to 56076149 756 CpG island CpG island 8329
Tssr138804 16 56075399 to 56075492 93 + TSS region transcription start site region 138804
Tssr138805 16 56075508 to 56075518 10 + TSS region transcription start site region 138805
Gm18723 16 56095713 to 56096555 842 - pseudogene predicted gene, 18723
C330019O22Rik 16 56115268 to 56116254 986 unclassified gene RIKEN cDNA C330019O22 gene
Tssr141553 16 56116250 to 56116265 15 - TSS region transcription start site region 141553
Tssr138806 16 56127372 to 56127395 23 + TSS region transcription start site region 138806
Tssr138807 16 56127403 to 56127439 36 + TSS region transcription start site region 138807
Gm49682 16 56149166 to 56149562 396 - pseudogene predicted gene, 49682
Tssr138808 16 56193604 to 56193614 10 + TSS region transcription start site region 138808
Tssr138809 16 56204284 to 56204289 5 + TSS region transcription start site region 138809
Impg2 16 56204313 to 56273756 69443 + protein coding gene interphotoreceptor matrix proteoglycan 2
Tssr138810 16 56204325 to 56204338 13 + TSS region transcription start site region 138810