Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:54633235-55933240

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Mit46 16 54685934 to 54686174 240 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 46
Gm8881 16 54826498 to 54827894 1396 - pseudogene predicted gene 8881
D16Mit199 16 54915710 to 54915817 107 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 199
Gm22977 16 54972431 to 54972537 106 + snRNA gene predicted gene, 22977
Gm5769 16 55074405 to 55074986 581 + pseudogene predicted gene 5769
Zpld1 16 55225175 to 55297986 72811 - protein coding gene zona pellucida like domain containing 1
D16Mit221 16 55231923 to 55232039 116 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 221
Tssr4912 16 55262155 to 55262159 4 + TSS region transcription start site region 4912
Tssr4913 16 55282923 to 55282958 35 - TSS region transcription start site region 4913
Tssr4914 16 55283235 to 55283240 5 - TSS region transcription start site region 4914
Tssr141501 16 55283281 to 55283287 6 - TSS region transcription start site region 141501
Gm45968 16 55420838 to 55582490 161652 - lncRNA gene predicted gene, 45968
Mir5118 16 55494731 to 55494797 66 + miRNA gene microRNA 5118
Tssr141502 16 55522302 to 55522311 9 - TSS region transcription start site region 141502
Tssr141503 16 55523668 to 55523679 11 - TSS region transcription start site region 141503
Tssr141504 16 55523680 to 55523701 21 - TSS region transcription start site region 141504
Tssr141505 16 55523731 to 55523746 15 - TSS region transcription start site region 141505
Tssr141506 16 55523781 to 55523784 3 - TSS region transcription start site region 141506
Tssr138787 16 55526261 to 55526266 5 + TSS region transcription start site region 138787
D16Mit127 16 55533975 to 55534078 103 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 127
Tssr4915 16 55551216 to 55551219 3 + TSS region transcription start site region 4915
Gm23003 16 55594782 to 55594888 106 - snRNA gene predicted gene, 23003
D16Mit184 16 55603180 to 55603377 197 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 184
Gm19771 16 55739918 to 55740152 234 + pseudogene predicted gene, 19771
Gm26369 16 55779045 to 55779144 99 - snRNA gene predicted gene, 26369
Tssr141507 16 55787943 to 55787964 21 - TSS region transcription start site region 141507
Tssr141508 16 55798937 to 55798973 36 - TSS region transcription start site region 141508
Nfkbiz 16 55811377 to 55838641 27264 - protein coding gene nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta
Tssr141509 16 55811942 to 55811958 16 - TSS region transcription start site region 141509
Tssr141510 16 55812235 to 55812248 13 - TSS region transcription start site region 141510
Tssr141511 16 55816526 to 55816540 14 - TSS region transcription start site region 141511
Tssr138788 16 55816773 to 55816793 20 + TSS region transcription start site region 138788
Tssr138789 16 55818093 to 55818128 35 + TSS region transcription start site region 138789
Tssr138790 16 55818139 to 55818190 51 + TSS region transcription start site region 138790
Tssr141512 16 55818299 to 55818337 38 - TSS region transcription start site region 141512
Tssr141513 16 55818454 to 55818475 21 - TSS region transcription start site region 141513
Tssr141514 16 55818513 to 55818537 24 - TSS region transcription start site region 141514
Tssr138791 16 55818554 to 55818558 4 + TSS region transcription start site region 138791
Tssr141515 16 55818958 to 55818960 2 - TSS region transcription start site region 141515
Tssr141516 16 55819559 to 55819570 11 - TSS region transcription start site region 141516
Tssr141517 16 55819623 to 55819637 14 - TSS region transcription start site region 141517
Tssr138792 16 55820385 to 55820414 29 + TSS region transcription start site region 138792
Cpgi8318 16 55821494 to 55822660 1166 CpG island CpG island 8318
Tssr141518 16 55821929 to 55821947 18 - TSS region transcription start site region 141518
Tssr141519 16 55822036 to 55822092 56 - TSS region transcription start site region 141519
Tssr141520 16 55822128 to 55822145 17 - TSS region transcription start site region 141520
Tssr141521 16 55822525 to 55822556 31 - TSS region transcription start site region 141521
Tssr141522 16 55828453 to 55828460 7 - TSS region transcription start site region 141522
Tssr141523 16 55831136 to 55831166 30 - TSS region transcription start site region 141523
Tssr141524 16 55831224 to 55831244 20 - TSS region transcription start site region 141524
Tssr141525 16 55831263 to 55831287 24 - TSS region transcription start site region 141525
Tssr141526 16 55831289 to 55831294 5 - TSS region transcription start site region 141526
Tssr141527 16 55831320 to 55831331 11 - TSS region transcription start site region 141527
Tssr141528 16 55831485 to 55831497 12 - TSS region transcription start site region 141528
Tssr141529 16 55838591 to 55838600 9 - TSS region transcription start site region 141529
Cpgi8319 16 55838612 to 55838983 371 CpG island CpG island 8319
Tssr141530 16 55838630 to 55838641 11 - TSS region transcription start site region 141530
Tssr141531 16 55838644 to 55838661 17 - TSS region transcription start site region 141531
Tssr141532 16 55838666 to 55838675 9 - TSS region transcription start site region 141532
Tssr141533 16 55838780 to 55838789 9 - TSS region transcription start site region 141533
Tssr141534 16 55838827 to 55838853 26 - TSS region transcription start site region 141534
Nxpe3 16 55839953 to 55895285 55332 - protein coding gene neurexophilin and PC-esterase domain family, member 3
Tssr141535 16 55847806 to 55847817 11 - TSS region transcription start site region 141535
Cpgi8320 16 55849287 to 55849491 204 CpG island CpG island 8320
Tssr141536 16 55865566 to 55865570 4 - TSS region transcription start site region 141536
Gm19041 16 55870304 to 55870824 520 + pseudogene predicted gene, 19041
Gm17809 16 55883072 to 55884491 1419 - pseudogene predicted gene, 17809
Cpgi8321 16 55894699 to 55895744 1045 CpG island CpG island 8321
Tssr141537 16 55895184 to 55895214 30 - TSS region transcription start site region 141537
Tssr141538 16 55895324 to 55895338 14 - TSS region transcription start site region 141538
Tssr141539 16 55895355 to 55895410 55 - TSS region transcription start site region 141539
Cep97 16 55899888 to 55934848 34960 - protein coding gene centrosomal protein 97
Cpgi8322 16 55905275 to 55905842 567 CpG island CpG island 8322
Tssr141540 16 55916843 to 55916851 8 - TSS region transcription start site region 141540
Tssr141541 16 55923863 to 55923881 18 - TSS region transcription start site region 141541
Tssr141542 16 55923986 to 55923992 6 - TSS region transcription start site region 141542