Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:4901196-5005444

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Mgrn1 16 4886249 to 4938296 52047 + protein coding gene mahogunin, ring finger 1
Tssr136888 16 4908709 to 4908712 3 + TSS region transcription start site region 136888
Tssr136889 16 4913182 to 4913215 33 + TSS region transcription start site region 136889
Tssr136890 16 4927731 to 4927756 25 + TSS region transcription start site region 136890
Gm16861 16 4935164 to 4939585 4421 - antisense lncRNA gene predicted gene, 16861
Cpgi7924 16 4938967 to 4939696 729 CpG island CpG island 7924
Tssr136891 16 4939099 to 4939142 43 + TSS region transcription start site region 136891
Nudt16l1 16 4939111 to 4941028 1917 + protein coding gene nudix (nucleoside diphosphate linked moiety X)-type motif 16-like 1
Tssr139816 16 4939579 to 4939603 24 - TSS region transcription start site region 139816
Tssr139817 16 4939607 to 4939624 17 - TSS region transcription start site region 139817
Anks3 16 4941436 to 4964205 22769 - protein coding gene ankyrin repeat and sterile alpha motif domain containing 3
Gm36681 16 4951196 to 4955444 4248 + lncRNA gene predicted gene, 36681
Cpgi7925 16 4963829 to 4964845 1016 CpG island CpG island 7925
Tssr4780 16 4964012 to 4964017 5 - TSS region transcription start site region 4780
Tssr139818 16 4964168 to 4964220 52 - TSS region transcription start site region 139818
Tssr136892 16 4964250 to 4964272 22 + TSS region transcription start site region 136892
4930451G09Rik 16 4964289 to 4978962 14673 + protein coding gene RIKEN cDNA 4930451G09 gene
Tssr136893 16 4964564 to 4964605 41 + TSS region transcription start site region 136893
Sept12 16 4986858 to 4997852 10994 - protein coding gene septin 12
Tssr136894 16 4987449 to 4987465 16 + TSS region transcription start site region 136894
Tssr139819 16 4997782 to 4997831 49 - TSS region transcription start site region 139819