Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:3909456-4009472

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20695 16 3884648 to 3919517 34869 + protein coding gene predicted gene 20695
Cluap1 16 3908801 to 3941147 32346 + protein coding gene clusterin associated protein 1
Tssr136841 16 3926245 to 3926252 7 + TSS region transcription start site region 136841
Gm15538 16 3926428 to 3926740 312 + pseudogene predicted gene 15538
Gm23493 16 3927199 to 3927286 87 + miRNA gene predicted gene, 23493
Gm15539 16 3927637 to 3928166 529 + pseudogene predicted gene 15539
Gm15537 16 3927789 to 3929357 1568 - antisense lncRNA gene predicted gene 15537
Tssr139739 16 3929209 to 3929235 26 - TSS region transcription start site region 139739
Nlrc3 16 3945007 to 3976632 31625 - protein coding gene NLR family, CARD domain containing 3
Tssr139740 16 3959456 to 3959472 16 - TSS region transcription start site region 139740
Tssr139741 16 3959476 to 3959511 35 - TSS region transcription start site region 139741
Pbwg19 16 3962915 to 3963024 109 QTL postnatal body weight growth 19
D16Mit32 16 3962915 to 3963024 109 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 32
Tssr139742 16 3976488 to 3976512 24 - TSS region transcription start site region 139742
Tssr139743 16 3976519 to 3976535 16 - TSS region transcription start site region 139743
Tssr139744 16 3976541 to 3976567 26 - TSS region transcription start site region 139744
Tssr139745 16 3976568 to 3976575 7 - TSS region transcription start site region 139745
Tssr139746 16 3976626 to 3976636 10 - TSS region transcription start site region 139746
Slx4 16 3979105 to 4003770 24665 - protein coding gene SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
Cpgi7904 16 4003354 to 4004172 818 CpG island CpG island 7904
Tssr139747 16 4003721 to 4003735 14 - TSS region transcription start site region 139747
Tssr139748 16 4003750 to 4003828 78 - TSS region transcription start site region 139748
Tssr136842 16 4003924 to 4003946 22 + TSS region transcription start site region 136842
Rapop1 16 15913189 to 3962915 -11950274 QTL radiation-induced apoptosis 1