Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:3907789-3949357

Filter by:
18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm20695 16 3884648 to 3919517 34869 + protein coding gene predicted gene 20695
1700037C18Rik 16 3905798 to 3908689 2891 - protein coding gene RIKEN cDNA 1700037C18 gene
Tssr136838 16 3907776 to 3907820 44 + TSS region transcription start site region 136838
Cpgi7903 16 3908492 to 3909322 830 CpG island CpG island 7903
Tssr139736 16 3908517 to 3908543 26 - TSS region transcription start site region 139736
Tssr139737 16 3908596 to 3908611 15 - TSS region transcription start site region 139737
Tssr139738 16 3908639 to 3908686 47 - TSS region transcription start site region 139738
Cluap1 16 3908801 to 3941147 32346 + protein coding gene clusterin associated protein 1
1700016D08Rik 16 3908825 to 3909192 367 - protein coding gene RIKEN cDNA 1700016D08 gene
Tssr136839 16 3908949 to 3909031 82 + TSS region transcription start site region 136839
Tssr136840 16 3909032 to 3909089 57 + TSS region transcription start site region 136840
Tssr136841 16 3926245 to 3926252 7 + TSS region transcription start site region 136841
Gm15538 16 3926428 to 3926740 312 + pseudogene predicted gene 15538
Gm23493 16 3927199 to 3927286 87 + miRNA gene predicted gene, 23493
Gm15539 16 3927637 to 3928166 529 + pseudogene predicted gene 15539
Gm15537 16 3927789 to 3929357 1568 - antisense lncRNA gene predicted gene 15537
Tssr139739 16 3929209 to 3929235 26 - TSS region transcription start site region 139739
Nlrc3 16 3945007 to 3976632 31625 - protein coding gene NLR family, CARD domain containing 3