Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:38706240-39096289

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap31 16 38598343 to 38713035 114692 - protein coding gene Rho GTPase activating protein 31
Tssr141097 16 38709708 to 38709718 10 - TSS region transcription start site region 141097
D16Mit90 16 38710883 to 38710979 96 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 90
Tssr138407 16 38712174 to 38712178 4 + TSS region transcription start site region 138407
Tssr138408 16 38712297 to 38712314 17 + TSS region transcription start site region 138408
Cpgi8268 16 38712337 to 38713623 1286 CpG island CpG island 8268
Tssr138409 16 38712451 to 38712454 3 + TSS region transcription start site region 138409
Tssr141098 16 38712734 to 38712745 11 - TSS region transcription start site region 141098
Tssr141099 16 38712828 to 38712839 11 - TSS region transcription start site region 141099
Tssr141100 16 38712842 to 38712860 18 - TSS region transcription start site region 141100
Tssr141101 16 38712862 to 38712903 41 - TSS region transcription start site region 141101
Tssr141102 16 38712924 to 38712937 13 - TSS region transcription start site region 141102
Tssr141103 16 38712947 to 38712978 31 - TSS region transcription start site region 141103
Tssr138410 16 38712958 to 38712962 4 + TSS region transcription start site region 138410
Tssr4875 16 38712995 to 38712997 2 - TSS region transcription start site region 4875
Tssr141104 16 38713005 to 38713016 11 - TSS region transcription start site region 141104
Tssr141105 16 38713068 to 38713083 15 - TSS region transcription start site region 141105
Tssr141106 16 38713207 to 38713218 11 - TSS region transcription start site region 141106
Tssr141107 16 38713235 to 38713304 69 - TSS region transcription start site region 141107
Tssr141108 16 38713323 to 38713342 19 - TSS region transcription start site region 141108
Tssr141109 16 38713354 to 38713363 9 - TSS region transcription start site region 141109
Tssr141110 16 38713391 to 38713407 16 - TSS region transcription start site region 141110
Tssr141111 16 38713428 to 38713439 11 - TSS region transcription start site region 141111
Tssr141112 16 38713461 to 38713492 31 - TSS region transcription start site region 141112
Cpgi8269 16 38742045 to 38742907 862 CpG island CpG island 8269
Tssr138411 16 38742254 to 38742279 25 + TSS region transcription start site region 138411
B4galt4 16 38742264 to 38769049 26785 + protein coding gene UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
Tssr138412 16 38742280 to 38742307 27 + TSS region transcription start site region 138412
Gm15575 16 38748729 to 38750309 1580 - pseudogene predicted gene 15575
Tssr138413 16 38761701 to 38761707 6 + TSS region transcription start site region 138413
Upk1b 16 38773182 to 38800203 27021 - protein coding gene uroplakin 1B
Tssr141113 16 38781169 to 38781180 11 - TSS region transcription start site region 141113
Tssr141114 16 38783513 to 38783525 12 - TSS region transcription start site region 141114
Tssr141115 16 38783602 to 38783613 11 - TSS region transcription start site region 141115
Tssr141116 16 38783720 to 38783736 16 - TSS region transcription start site region 141116
Tssr141117 16 38783860 to 38783866 6 - TSS region transcription start site region 141117
Tssr138414 16 38784218 to 38784243 25 + TSS region transcription start site region 138414
Tssr141118 16 38784262 to 38784283 21 - TSS region transcription start site region 141118
Tssr141119 16 38800193 to 38800209 16 - TSS region transcription start site region 141119
Tssr141120 16 38800217 to 38800228 11 - TSS region transcription start site region 141120
Tssr141121 16 38800235 to 38800246 11 - TSS region transcription start site region 141121
Tssr141122 16 38800277 to 38800286 9 - TSS region transcription start site region 141122
Tssr141123 16 38800326 to 38800337 11 - TSS region transcription start site region 141123
Tssr141124 16 38800343 to 38800358 15 - TSS region transcription start site region 141124
Tex55 16 38812206 to 38828749 16543 - protein coding gene testis expressed 55
Gm15803 16 38813990 to 38814383 393 + pseudogene predicted gene 15803
Tssr141125 16 38828725 to 38828736 11 - TSS region transcription start site region 141125
Tssr141126 16 38828745 to 38828754 9 - TSS region transcription start site region 141126
Tssr141127 16 38828756 to 38828770 14 - TSS region transcription start site region 141127
Tssr141128 16 38828780 to 38828783 3 - TSS region transcription start site region 141128
Gm15802 16 38828864 to 38875713 46849 + antisense lncRNA gene predicted gene 15802
Tssr138415 16 38828899 to 38828908 9 + TSS region transcription start site region 138415
Tssr138416 16 38828911 to 38828920 9 + TSS region transcription start site region 138416
Tssr138417 16 38892502 to 38892534 32 + TSS region transcription start site region 138417
Igsf11 16 38892671 to 39027159 134488 + protein coding gene immunoglobulin superfamily, member 11
Tssr138418 16 38901240 to 38901289 49 + TSS region transcription start site region 138418
Cpgi8270 16 38902094 to 38902825 731 CpG island CpG island 8270
Tssr138419 16 38902253 to 38902297 44 + TSS region transcription start site region 138419
Tssr138420 16 38902305 to 38902316 11 + TSS region transcription start site region 138420
Tssr138421 16 38902325 to 38902364 39 + TSS region transcription start site region 138421
Tssr138422 16 38902372 to 38902437 65 + TSS region transcription start site region 138422
Tssr138423 16 38902438 to 38902462 24 + TSS region transcription start site region 138423
Tssr138424 16 38910110 to 38910115 5 + TSS region transcription start site region 138424
Gm22500 16 38927209 to 38927307 98 + snRNA gene predicted gene, 22500
Tssr138425 16 38931890 to 38931895 5 + TSS region transcription start site region 138425
Gm34258 16 38987086 to 39000126 13040 + pseudogene predicted gene, 34258
Tssr138426 16 39025789 to 39025804 15 + TSS region transcription start site region 138426
Tssr138427 16 39026188 to 39026195 7 + TSS region transcription start site region 138427
Tssr138428 16 39026743 to 39026747 4 + TSS region transcription start site region 138428