Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32751702-32947587

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55 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Muc4 16 32735886 to 32782391 46505 + protein coding gene mucin 4
Tssr138047 16 32751688 to 32751703 15 + TSS region transcription start site region 138047
Tssr138048 16 32751713 to 32751734 21 + TSS region transcription start site region 138048
Tssr138049 16 32752224 to 32752259 35 + TSS region transcription start site region 138049
Tssr138050 16 32752592 to 32752619 27 + TSS region transcription start site region 138050
Tssr138051 16 32753474 to 32753512 38 + TSS region transcription start site region 138051
Tssr138052 16 32755375 to 32755398 23 + TSS region transcription start site region 138052
Tssr138053 16 32755634 to 32755640 6 + TSS region transcription start site region 138053
Tssr138054 16 32755746 to 32755776 30 + TSS region transcription start site region 138054
Tssr138055 16 32756107 to 32756119 12 + TSS region transcription start site region 138055
Gm34825 16 32760228 to 32775748 15520 - lncRNA gene predicted gene, 34825
Gm41446 16 32764220 to 32766105 1885 - lncRNA gene predicted gene, 41446
Tssr138056 16 32776282 to 32776286 4 + TSS region transcription start site region 138056
Tssr138057 16 32776299 to 32776313 14 + TSS region transcription start site region 138057
Tssr138058 16 32776330 to 32776335 5 + TSS region transcription start site region 138058
Muc20 16 32777419 to 32797435 20016 - protein coding gene mucin 20
Tssr140821 16 32794675 to 32794688 13 - TSS region transcription start site region 140821
Tssr140822 16 32797372 to 32797377 5 - TSS region transcription start site region 140822
Tssr140823 16 32797413 to 32797461 48 - TSS region transcription start site region 140823
Smbd1 16 32804888 to 32810446 5558 - protein coding gene somatomedin B domain containing 1
Gm26769 16 32807483 to 32811206 3723 + antisense lncRNA gene predicted gene, 26769
Tssr140824 16 32810455 to 32810466 11 - TSS region transcription start site region 140824
Tssr140825 16 32810482 to 32810494 12 - TSS region transcription start site region 140825
Cpgi8197 16 32814518 to 32814798 280 CpG island CpG island 8197
Rubcn 16 32821702 to 32877587 55885 - protein coding gene RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
Tssr138059 16 32822087 to 32822088 1 + TSS region transcription start site region 138059
Tssr140826 16 32866346 to 32866361 15 - TSS region transcription start site region 140826
Tssr140827 16 32867510 to 32867517 7 - TSS region transcription start site region 140827
Cpgi8198 16 32867886 to 32868411 525 CpG island CpG island 8198
Tssr140828 16 32868271 to 32868280 9 - TSS region transcription start site region 140828
Tssr140829 16 32868286 to 32868318 32 - TSS region transcription start site region 140829
Tssr140830 16 32868325 to 32868368 43 - TSS region transcription start site region 140830
Tssr140831 16 32869958 to 32869962 4 - TSS region transcription start site region 140831
Cpgi8199 16 32877346 to 32878575 1229 CpG island CpG island 8199
Fyttd1 16 32877500 to 32908875 31375 + protein coding gene forty-two-three domain containing 1
Tssr140832 16 32877609 to 32877635 26 - TSS region transcription start site region 140832
Tssr140833 16 32877637 to 32877674 37 - TSS region transcription start site region 140833
Tssr140834 16 32877687 to 32877715 28 - TSS region transcription start site region 140834
Tssr140835 16 32877723 to 32877742 19 - TSS region transcription start site region 140835
Tssr138060 16 32877775 to 32877831 56 + TSS region transcription start site region 138060
Tssr138061 16 32877833 to 32877863 30 + TSS region transcription start site region 138061
Tssr138062 16 32877885 to 32877894 9 + TSS region transcription start site region 138062
Tssr138063 16 32878085 to 32878095 10 + TSS region transcription start site region 138063
Tssr138064 16 32878101 to 32878121 20 + TSS region transcription start site region 138064
D16Mit134 16 32896138 to 32896286 148 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 134
D16Mit134.2 16 32896272 to 32896388 116 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 134.2
Tssr138065 16 32904839 to 32904844 5 + TSS region transcription start site region 138065
Tssr138066 16 32906445 to 32906459 14 + TSS region transcription start site region 138066
Cpgi8200 16 32913892 to 32914909 1017 CpG island CpG island 8200
Tssr138067 16 32914094 to 32914138 44 + TSS region transcription start site region 138067
Lrch3 16 32914100 to 33015647 101547 + protein coding gene leucine-rich repeats and calponin homology (CH) domain containing 3
Tssr138068 16 32916290 to 32916295 5 + TSS region transcription start site region 138068
Gm6611 16 32923218 to 32924489 1271 + pseudogene predicted gene 6611
Tssr138069 16 32930093 to 32930106 13 + TSS region transcription start site region 138069
Tssr138070 16 32930941 to 32930950 9 + TSS region transcription start site region 138070