Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:32651561-32851605

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63 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Aod1 16 32312022 to 32704294 392272 QTL autoimmune ovarian dysgenesis 1
Tnk2 16 32644099 to 32683493 39394 + protein coding gene tyrosine kinase, non-receptor, 2
Cpgi8195 16 32658802 to 32659207 405 CpG island CpG island 8195
Tssr138021 16 32658904 to 32658949 45 + TSS region transcription start site region 138021
Tssr138022 16 32661223 to 32661245 22 + TSS region transcription start site region 138022
Tnk2os 16 32665223 to 32668197 2974 - antisense lncRNA gene tyrosine kinase, non-receptor 2, opposite strand
Tssr138023 16 32670787 to 32670788 1 + TSS region transcription start site region 138023
Tssr138024 16 32673144 to 32673188 44 + TSS region transcription start site region 138024
Cpgi8196 16 32697988 to 32698203 215 CpG island CpG island 8196
Gm34766 16 32698667 to 32704256 5589 + lncRNA gene predicted gene, 34766
Pstc4 16 32704091 to 32704294 203 QTL periosteal circumference 4
Arrd3 16 32704091 to 65669666 32965575 QTL age-related retinal degeneration 3
D16Mit60 16 32704091 to 32704294 203 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 60
D16Mit193 16 32722083 to 32722281 198 DNA segment DNA Segment, Chr 16, Massachusetts Institute of Technology 193
Gm9556 16 32726666 to 32727605 939 + pseudogene predicted gene 9556
Muc4 16 32735886 to 32782391 46505 + protein coding gene mucin 4
Tssr138025 16 32736263 to 32736281 18 + TSS region transcription start site region 138025
Tssr138026 16 32736286 to 32736304 18 + TSS region transcription start site region 138026
Tssr138027 16 32750332 to 32750343 11 + TSS region transcription start site region 138027
Tssr138028 16 32750400 to 32750411 11 + TSS region transcription start site region 138028
Tssr138029 16 32750477 to 32750521 44 + TSS region transcription start site region 138029
Tssr138030 16 32750633 to 32750648 15 + TSS region transcription start site region 138030
Tssr138031 16 32750651 to 32750662 11 + TSS region transcription start site region 138031
Tssr138032 16 32750688 to 32750707 19 + TSS region transcription start site region 138032
Tssr138033 16 32750811 to 32750824 13 + TSS region transcription start site region 138033
Tssr138034 16 32750880 to 32750900 20 + TSS region transcription start site region 138034
Tssr138035 16 32750914 to 32750931 17 + TSS region transcription start site region 138035
Tssr138036 16 32750945 to 32751029 84 + TSS region transcription start site region 138036
Tssr138037 16 32751035 to 32751049 14 + TSS region transcription start site region 138037
Tssr138038 16 32751058 to 32751069 11 + TSS region transcription start site region 138038
Tssr138039 16 32751142 to 32751165 23 + TSS region transcription start site region 138039
Tssr138040 16 32751225 to 32751237 12 + TSS region transcription start site region 138040
Tssr138041 16 32751337 to 32751354 17 + TSS region transcription start site region 138041
Tssr138042 16 32751363 to 32751373 10 + TSS region transcription start site region 138042
Tssr138043 16 32751378 to 32751391 13 + TSS region transcription start site region 138043
Tssr138044 16 32751431 to 32751443 12 + TSS region transcription start site region 138044
Tssr138045 16 32751469 to 32751487 18 + TSS region transcription start site region 138045
Tssr138046 16 32751561 to 32751605 44 + TSS region transcription start site region 138046
Tssr138047 16 32751688 to 32751703 15 + TSS region transcription start site region 138047
Tssr138048 16 32751713 to 32751734 21 + TSS region transcription start site region 138048
Tssr138049 16 32752224 to 32752259 35 + TSS region transcription start site region 138049
Tssr138050 16 32752592 to 32752619 27 + TSS region transcription start site region 138050
Tssr138051 16 32753474 to 32753512 38 + TSS region transcription start site region 138051
Tssr138052 16 32755375 to 32755398 23 + TSS region transcription start site region 138052
Tssr138053 16 32755634 to 32755640 6 + TSS region transcription start site region 138053
Tssr138054 16 32755746 to 32755776 30 + TSS region transcription start site region 138054
Tssr138055 16 32756107 to 32756119 12 + TSS region transcription start site region 138055
Gm34825 16 32760228 to 32775748 15520 - lncRNA gene predicted gene, 34825
Gm41446 16 32764220 to 32766105 1885 - lncRNA gene predicted gene, 41446
Tssr138056 16 32776282 to 32776286 4 + TSS region transcription start site region 138056
Tssr138057 16 32776299 to 32776313 14 + TSS region transcription start site region 138057
Tssr138058 16 32776330 to 32776335 5 + TSS region transcription start site region 138058
Muc20 16 32777419 to 32797435 20016 - protein coding gene mucin 20
Tssr140821 16 32794675 to 32794688 13 - TSS region transcription start site region 140821
Tssr140822 16 32797372 to 32797377 5 - TSS region transcription start site region 140822
Tssr140823 16 32797413 to 32797461 48 - TSS region transcription start site region 140823
Smbd1 16 32804888 to 32810446 5558 - protein coding gene somatomedin B domain containing 1
Gm26769 16 32807483 to 32811206 3723 + antisense lncRNA gene predicted gene, 26769
Tssr140824 16 32810455 to 32810466 11 - TSS region transcription start site region 140824
Tssr140825 16 32810482 to 32810494 12 - TSS region transcription start site region 140825
Cpgi8197 16 32814518 to 32814798 280 CpG island CpG island 8197
Rubcn 16 32821702 to 32877587 55885 - protein coding gene RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein
Tssr138059 16 32822087 to 32822088 1 + TSS region transcription start site region 138059