Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:31371082-31683483

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1700007E05Rik 16 31376506 to 31379133 2627 - pseudogene RIKEN cDNA 1700007E05 gene
Gm49736 16 31412467 to 31416491 4024 + lincRNA gene predicted gene, 49736
Tssr140755 16 31421368 to 31421378 10 - TSS region transcription start site region 140755
Tssr137893 16 31422268 to 31422278 10 + TSS region transcription start site region 137893
Tssr137894 16 31422288 to 31422308 20 + TSS region transcription start site region 137894
Bdh1 16 31422297 to 31458901 36604 + protein coding gene 3-hydroxybutyrate dehydrogenase, type 1
Tssr137895 16 31422315 to 31422347 32 + TSS region transcription start site region 137895
Gm15743 16 31427876 to 31429776 1900 - antisense lncRNA gene predicted gene 15743
Cpgi8171 16 31428474 to 31430296 1822 CpG island CpG island 8171
Tssr137896 16 31428745 to 31428755 10 + TSS region transcription start site region 137896
Tssr137897 16 31428757 to 31428762 5 + TSS region transcription start site region 137897
Tssr137898 16 31428764 to 31428837 73 + TSS region transcription start site region 137898
Tssr137899 16 31428870 to 31428881 11 + TSS region transcription start site region 137899
Tssr137900 16 31428893 to 31428902 9 + TSS region transcription start site region 137900
Tssr140756 16 31429646 to 31429691 45 - TSS region transcription start site region 140756
Tssr140757 16 31429719 to 31429741 22 - TSS region transcription start site region 140757
Tssr137901 16 31450197 to 31450210 13 + TSS region transcription start site region 137901
Tssr137902 16 31450229 to 31450238 9 + TSS region transcription start site region 137902
Tssr137903 16 31455105 to 31455117 12 + TSS region transcription start site region 137903
Tssr137904 16 31455120 to 31455134 14 + TSS region transcription start site region 137904
Tssr137905 16 31455140 to 31455160 20 + TSS region transcription start site region 137905
Tssr137906 16 31456655 to 31456680 25 + TSS region transcription start site region 137906
Gm49695 16 31469926 to 31476353 6427 + lincRNA gene predicted gene, 49695
Gm34032 16 31476082 to 31578483 102401 - lncRNA gene predicted gene, 34032
Gm46560 16 31508387 to 31511777 3390 + lincRNA gene predicted gene, 46560
Gm34256 16 31590196 to 31593220 3024 - lincRNA gene predicted gene, 34256
Gm536 16 31617868 to 31638979 21111 + lincRNA gene predicted gene 536
Cpgi8172 16 31663294 to 31664689 1395 CpG island CpG island 8172
Dlg1 16 31663443 to 31873356 209913 + protein coding gene discs large MAGUK scaffold protein 1
Tssr137907 16 31663841 to 31663912 71 + TSS region transcription start site region 137907
Tssr137908 16 31663937 to 31663980 43 + TSS region transcription start site region 137908
Tssr137909 16 31664110 to 31664118 8 + TSS region transcription start site region 137909
Tssr137910 16 31664130 to 31664178 48 + TSS region transcription start site region 137910
Tssr137911 16 31664185 to 31664188 3 + TSS region transcription start site region 137911
Gm49712 16 31679241 to 31680609 1368 + unclassified gene predicted gene, 49712