Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:29540810-29964312

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Atp13a4 16 29395853 to 29544864 149011 - protein coding gene ATPase type 13A4
Tssr140683 16 29541384 to 29541409 25 - TSS region transcription start site region 140683
Tssr140684 16 29541541 to 29541558 17 - TSS region transcription start site region 140684
Tssr140685 16 29544852 to 29544869 17 - TSS region transcription start site region 140685
Cpgi8144 16 29579194 to 29579733 539 CpG island CpG island 8144
Tssr137846 16 29579299 to 29579310 11 + TSS region transcription start site region 137846
Tssr137847 16 29579331 to 29579342 11 + TSS region transcription start site region 137847
Opa1 16 29579334 to 29654884 75550 + protein coding gene OPA1, mitochondrial dynamin like GTPase
Tssr137848 16 29579347 to 29579417 70 + TSS region transcription start site region 137848
Tssr137849 16 29579426 to 29579439 13 + TSS region transcription start site region 137849
Tssr137850 16 29579441 to 29579459 18 + TSS region transcription start site region 137850
D630050H08Rik 16 29641378 to 29643447 2069 unclassified gene RIKEN cDNA D630050H08 gene
Tssr137851 16 29646436 to 29646440 4 + TSS region transcription start site region 137851
Gm49636 16 29750810 to 29754312 3502 - lincRNA gene predicted gene, 49636
Tssr140686 16 29788196 to 29788200 4 - TSS region transcription start site region 140686
9530020O07Rik 16 29809388 to 29814107 4719 protein coding gene RIKEN cDNA 9530020O07 gene
Gm26834 16 29811058 to 29837814 26756 + lincRNA gene predicted gene, 26834
Gm46567 16 29813447 to 29814642 1195 + protein coding gene predicted gene, 46567
Cpgi8145 16 29813539 to 29814468 929 CpG island CpG island 8145
Gm32679 16 29829456 to 29834728 5272 - lincRNA gene predicted gene, 32679
Tssr140687 16 29834722 to 29834736 14 - TSS region transcription start site region 140687
Cpgi8146 16 29839320 to 29839657 337 CpG island CpG island 8146
Tssr137852 16 29839349 to 29839385 36 + TSS region transcription start site region 137852
Tssr137853 16 29843615 to 29843621 6 + TSS region transcription start site region 137853
Tssr137854 16 29843874 to 29843923 49 + TSS region transcription start site region 137854
Tssr140688 16 29845723 to 29845769 46 - TSS region transcription start site region 140688
Tssr137855 16 29845957 to 29845966 9 + TSS region transcription start site region 137855
Tssr140689 16 29849607 to 29849621 14 - TSS region transcription start site region 140689
Tssr140690 16 29849629 to 29849645 16 - TSS region transcription start site region 140690
Gm32740 16 29860564 to 29867537 6973 + lncRNA gene predicted gene, 32740
Gm26569 16 29907519 to 29946754 39235 - lincRNA gene predicted gene, 26569
Cpgi8147 16 29945893 to 29946367 474 CpG island CpG island 8147
Tssr140691 16 29946499 to 29946532 33 - TSS region transcription start site region 140691
Gm1968 16 29957927 to 29979124 21197 - lincRNA gene predicted gene 1968