Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:22404685-22604693

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Etv5 16 22381313 to 22439570 58257 - protein coding gene ets variant 5
Tssr140469 16 22406048 to 22406060 12 - TSS region transcription start site region 140469
Tssr140470 16 22406153 to 22406162 9 - TSS region transcription start site region 140470
Tssr140471 16 22411747 to 22411784 37 - TSS region transcription start site region 140471
Tssr140472 16 22411793 to 22411820 27 - TSS region transcription start site region 140472
Tssr140473 16 22411822 to 22411850 28 - TSS region transcription start site region 140473
Tssr140474 16 22411860 to 22411875 15 - TSS region transcription start site region 140474
Tssr140475 16 22411876 to 22411896 20 - TSS region transcription start site region 140475
Tssr140476 16 22411917 to 22411926 9 - TSS region transcription start site region 140476
Tssr140477 16 22412895 to 22412947 52 - TSS region transcription start site region 140477
Tssr140478 16 22412959 to 22412981 22 - TSS region transcription start site region 140478
Cpgi8109 16 22432068 to 22432236 168 CpG island CpG island 8109
Tssr140479 16 22436550 to 22436565 15 - TSS region transcription start site region 140479
Cpgi8110 16 22438430 to 22440592 2162 CpG island CpG island 8110
Tssr140480 16 22439581 to 22439603 22 - TSS region transcription start site region 140480
Tssr140481 16 22439608 to 22439625 17 - TSS region transcription start site region 140481
Tssr140482 16 22439731 to 22439733 2 - TSS region transcription start site region 140482
Tssr137546 16 22439951 to 22439965 14 + TSS region transcription start site region 137546
Dgkg 16 22468461 to 22657221 188760 - protein coding gene diacylglycerol kinase, gamma
Tssr140483 16 22469263 to 22469280 17 - TSS region transcription start site region 140483
Tssr140484 16 22504685 to 22504693 8 - TSS region transcription start site region 140484
9230117E06Rik 16 22511480 to 22517681 6201 + antisense lncRNA gene RIKEN cDNA 9230117E06 gene
Tssr137547 16 22515007 to 22515024 17 + TSS region transcription start site region 137547
Gm30251 16 22528218 to 22528784 566 + pseudogene predicted gene, 30251
Mir8095 16 22532056 to 22532184 128 - miRNA gene microRNA 8095
Gm9525 16 22535028 to 22535297 269 - pseudogene predicted gene 9525
Tssr140485 16 22535391 to 22535397 6 - TSS region transcription start site region 140485
Gm49565 16 22540473 to 22543886 3413 + unclassified gene predicted gene, 49565
Tssr137548 16 22546954 to 22546990 36 + TSS region transcription start site region 137548
Gm15651 16 22548553 to 22551149 2596 + antisense lncRNA gene predicted gene 15651
Tssr140486 16 22561061 to 22561083 22 - TSS region transcription start site region 140486
Tssr140487 16 22561106 to 22561120 14 - TSS region transcription start site region 140487
Cpgi8111 16 22572568 to 22573090 522 CpG island CpG island 8111
Gm41433 16 22584409 to 22590154 5745 + lncRNA gene predicted gene, 41433
Gm22481 16 22595029 to 22595220 191 + unclassified non-coding RNA gene predicted gene, 22481