Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:21796462-21996475

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
1300002E11Rik 16 21794347 to 21809040 14693 + lincRNA gene RIKEN cDNA 1300002E11 gene
Map3k13 16 21825170 to 21933439 108269 + protein coding gene mitogen-activated protein kinase kinase kinase 13
Tssr137521 16 21826017 to 21826045 28 + TSS region transcription start site region 137521
Mopkd2 16 21827564 to 21827664 100 QTL modifier of polycystic kidney disease progression 2
D16Mit1 16 21827564 to 21827664 100 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 1
Loh2 16 21827564 to 51386028 29558464 heritable phenotypic marker loss of heterozygosity, region 2
Gm49607 16 21833850 to 21836555 2705 - lincRNA gene predicted gene, 49607
Tssr137522 16 21835970 to 21835973 3 + TSS region transcription start site region 137522
Gm5962 16 21841050 to 21841544 494 - pseudogene predicted gene 5962
Gm26744 16 21843451 to 21845776 2325 - lincRNA gene predicted gene, 26744
Tssr137523 16 21855110 to 21855126 16 + TSS region transcription start site region 137523
Tssr137524 16 21855127 to 21855142 15 + TSS region transcription start site region 137524
Tssr137525 16 21855145 to 21855166 21 + TSS region transcription start site region 137525
Tssr137526 16 21867972 to 21867981 9 + TSS region transcription start site region 137526
Tssr137527 16 21896462 to 21896475 13 + TSS region transcription start site region 137527
Gm6467 16 21896506 to 21897116 610 + pseudogene predicted gene 6467
2610020F03Rik 16 21907922 to 21908777 855 - lincRNA gene RIKEN cDNA 2610020F03 gene
Tssr137528 16 21931056 to 21931059 3 + TSS region transcription start site region 137528
Tmem41a 16 21934327 to 21947552 13225 - protein coding gene transmembrane protein 41a
Cpgi8101 16 21946814 to 21947943 1129 CpG island CpG island 8101
Tssr140441 16 21947453 to 21947517 64 - TSS region transcription start site region 140441
Tssr140442 16 21947536 to 21947577 41 - TSS region transcription start site region 140442
Liph 16 21953817 to 21995658 41841 - protein coding gene lipase, member H
Cpgi8102 16 21976100 to 21976436 336 CpG island CpG island 8102
D16Mit35 16 21977849 to 21977997 148 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 35
Tssr137529 16 21982353 to 21982363 10 + TSS region transcription start site region 137529
Tssr140443 16 21984310 to 21984335 25 - TSS region transcription start site region 140443
Cpgi8103 16 21995322 to 21995536 214 CpG island CpG island 8103
Tssr140444 16 21995389 to 21995392 3 - TSS region transcription start site region 140444
Tssr140445 16 21995455 to 21995472 17 - TSS region transcription start site region 140445
Tssr140446 16 21995478 to 21995517 39 - TSS region transcription start site region 140446
Tssr140447 16 21995539 to 21995548 9 - TSS region transcription start site region 140447