Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:20447000-20587072

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D16Ertd778e 16 20451620 to 20451819 199 DNA segment DNA segment, Chr 16, ERATO Doi 778, expressed
Tssr140387 16 20454366 to 20454375 9 - TSS region transcription start site region 140387
Gm41432 16 20457538 to 20459284 1746 + lncRNA gene predicted gene, 41432
Gm20615 16 20488788 to 20491147 2359 + pseudogene predicted gene 20615
Cpgi8071 16 20498469 to 20499385 916 CpG island CpG island 8071
Tssr137432 16 20498793 to 20498804 11 + TSS region transcription start site region 137432
Eif2b5 16 20498817 to 20509323 10506 + protein coding gene eukaryotic translation initiation factor 2B, subunit 5 epsilon
Tssr137433 16 20498847 to 20498866 19 + TSS region transcription start site region 137433
Tssr137434 16 20498877 to 20498919 42 + TSS region transcription start site region 137434
Gm16618 16 20511133 to 20517766 6633 - antisense lncRNA gene predicted gene, 16618
Cpgi8072 16 20516425 to 20517572 1147 CpG island CpG island 8072
Tssr137435 16 20516885 to 20516896 11 + TSS region transcription start site region 137435
Tssr137436 16 20516962 to 20516999 37 + TSS region transcription start site region 137436
Dvl3 16 20516982 to 20534010 17028 + protein coding gene dishevelled segment polarity protein 3
Tssr137437 16 20517000 to 20517072 72 + TSS region transcription start site region 137437
Tssr137438 16 20517076 to 20517130 54 + TSS region transcription start site region 137438
Cpgi8073 16 20531154 to 20531313 159 CpG island CpG island 8073
Tssr137439 16 20531594 to 20531606 12 + TSS region transcription start site region 137439
Tssr137440 16 20531855 to 20531870 15 + TSS region transcription start site region 137440
Tssr137441 16 20532479 to 20532509 30 + TSS region transcription start site region 137441
Cpgi8074 16 20535242 to 20535998 756 CpG island CpG island 8074
Tssr137442 16 20535435 to 20535439 4 + TSS region transcription start site region 137442
Tssr137443 16 20535460 to 20535471 11 + TSS region transcription start site region 137443
Tssr137444 16 20535475 to 20535546 71 + TSS region transcription start site region 137444
Ap2m1 16 20535480 to 20544909 9429 + protein coding gene adaptor-related protein complex 2, mu 1 subunit
Tssr137445 16 20537501 to 20537511 10 + TSS region transcription start site region 137445
Tssr137446 16 20537593 to 20537618 25 + TSS region transcription start site region 137446
Tssr137447 16 20538220 to 20538250 30 + TSS region transcription start site region 137447
Tssr137448 16 20539974 to 20540022 48 + TSS region transcription start site region 137448
Tssr137449 16 20540586 to 20540597 11 + TSS region transcription start site region 137449
Tssr137450 16 20540627 to 20540640 13 + TSS region transcription start site region 137450
Tssr137451 16 20540663 to 20540766 103 + TSS region transcription start site region 137451
Gm15760 16 20545212 to 20548456 3244 - pseudogene predicted gene 15760
Cpgi8075 16 20548118 to 20549107 989 CpG island CpG island 8075
Tssr140388 16 20548432 to 20548460 28 - TSS region transcription start site region 140388
Abcf3 16 20548577 to 20561379 12802 + protein coding gene ATP-binding cassette, sub-family F (GCN20), member 3
Tssr137452 16 20548637 to 20548672 35 + TSS region transcription start site region 137452
Gm49744 16 20565577 to 20566028 451 - pseudogene predicted gene, 49744
Gm49745 16 20566358 to 20568508 2150 + lincRNA gene predicted gene, 49745
Gm49746 16 20571410 to 20571682 272 + pseudogene predicted gene, 49746
Gm20164 16 20583109 to 20583424 315 + pseudogene predicted gene, 20164