Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:20173672-20503684

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72 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Yeats2 16 20141063 to 20232573 91510 + protein coding gene YEATS domain containing 2
Tssr4810 16 20174731 to 20174753 22 + TSS region transcription start site region 4810
Gm10241 16 20176727 to 20177012 285 - pseudogene predicted pseudogene 10241
Tssr137424 16 20186510 to 20186519 9 + TSS region transcription start site region 137424
Tssr137425 16 20186544 to 20186549 5 + TSS region transcription start site region 137425
Tssr137426 16 20186572 to 20186577 5 + TSS region transcription start site region 137426
Tssr137427 16 20188791 to 20188802 11 + TSS region transcription start site region 137427
Tssr137428 16 20188809 to 20188811 2 + TSS region transcription start site region 137428
Tssr137429 16 20188822 to 20188831 9 + TSS region transcription start site region 137429
D16Mit28 16 20200579 to 20200725 146 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 28
Bwtn1 16 20200579 to 85803938 65603359 QTL body weight at necropsy 1
Map6d1 16 20233309 to 20241358 8049 - protein coding gene MAP6 domain containing 1
Gm41431 16 20236647 to 20237512 865 + lncRNA gene predicted gene, 41431
Cpgi8068 16 20240553 to 20241688 1135 CpG island CpG island 8068
Gm49566 16 20241027 to 20242114 1087 + antisense lncRNA gene predicted gene, 49566
Tssr140349 16 20241264 to 20241274 10 - TSS region transcription start site region 140349
Tssr140350 16 20241277 to 20241298 21 - TSS region transcription start site region 140350
Tssr140351 16 20241304 to 20241363 59 - TSS region transcription start site region 140351
Parl 16 20279818 to 20302387 22569 - protein coding gene presenilin associated, rhomboid-like
D16Ertd6e 16 20289236 to 20289435 199 DNA segment DNA segment, Chr 16, ERATO Doi 6, expressed
Tssr140352 16 20292132 to 20292143 11 - TSS region transcription start site region 140352
Tssr140353 16 20301787 to 20301808 21 - TSS region transcription start site region 140353
Tssr140354 16 20301811 to 20301820 9 - TSS region transcription start site region 140354
Cpgi8069 16 20301913 to 20302478 565 CpG island CpG island 8069
Tssr140355 16 20302324 to 20302345 21 - TSS region transcription start site region 140355
Tssr140356 16 20302358 to 20302401 43 - TSS region transcription start site region 140356
Cyp2ab1 16 20308387 to 20325404 17017 - protein coding gene cytochrome P450, family 2, subfamily ab, polypeptide 1
Tssr140357 16 20316802 to 20316805 3 - TSS region transcription start site region 140357
Abcc5 16 20331303 to 20426394 95091 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Tssr140358 16 20338672 to 20338684 12 - TSS region transcription start site region 140358
Tssr140359 16 20354710 to 20354719 9 - TSS region transcription start site region 140359
Tssr140360 16 20356177 to 20356207 30 - TSS region transcription start site region 140360
Tssr140361 16 20356293 to 20356322 29 - TSS region transcription start site region 140361
Tssr140362 16 20362222 to 20362232 10 - TSS region transcription start site region 140362
Tssr140363 16 20362239 to 20362261 22 - TSS region transcription start site region 140363
Tssr140364 16 20364106 to 20364136 30 - TSS region transcription start site region 140364
Tssr140365 16 20364157 to 20364169 12 - TSS region transcription start site region 140365
Tssr140366 16 20372147 to 20372195 48 - TSS region transcription start site region 140366
Tssr140367 16 20401095 to 20401099 4 - TSS region transcription start site region 140367
Tssr140368 16 20401778 to 20401794 16 - TSS region transcription start site region 140368
Tssr140369 16 20402274 to 20402288 14 - TSS region transcription start site region 140369
Tssr140370 16 20403320 to 20403338 18 - TSS region transcription start site region 140370
Tssr140371 16 20405489 to 20405502 13 - TSS region transcription start site region 140371
Tssr140372 16 20405515 to 20405537 22 - TSS region transcription start site region 140372
Tssr140373 16 20405547 to 20405575 28 - TSS region transcription start site region 140373
Tssr140374 16 20405584 to 20405607 23 - TSS region transcription start site region 140374
Tssr140375 16 20405631 to 20405640 9 - TSS region transcription start site region 140375
Tssr140376 16 20405828 to 20405849 21 - TSS region transcription start site region 140376
Tssr140377 16 20412796 to 20412799 3 - TSS region transcription start site region 140377
Tssr137430 16 20421253 to 20421261 8 + TSS region transcription start site region 137430
Tssr140378 16 20423481 to 20423504 23 - TSS region transcription start site region 140378
Tssr140379 16 20424324 to 20424371 47 - TSS region transcription start site region 140379
Tssr137431 16 20424439 to 20424447 8 + TSS region transcription start site region 137431
Cpgi8070 16 20425824 to 20426703 879 CpG island CpG island 8070
Tssr140380 16 20425881 to 20425971 90 - TSS region transcription start site region 140380
Tssr140381 16 20426189 to 20426233 44 - TSS region transcription start site region 140381
Tssr140382 16 20426293 to 20426314 21 - TSS region transcription start site region 140382
Tssr140383 16 20426317 to 20426320 3 - TSS region transcription start site region 140383
Tssr140384 16 20426322 to 20426372 50 - TSS region transcription start site region 140384
Tssr140385 16 20426375 to 20426386 11 - TSS region transcription start site region 140385
Tssr140386 16 20426388 to 20426399 11 - TSS region transcription start site region 140386
Gm20614 16 20436038 to 20443382 7344 + pseudogene predicted gene 20614
Gm23332 16 20445653 to 20445927 274 + unclassified non-coding RNA gene predicted gene, 23332
D16Ertd778e 16 20451620 to 20451819 199 DNA segment DNA segment, Chr 16, ERATO Doi 778, expressed
Tssr140387 16 20454366 to 20454375 9 - TSS region transcription start site region 140387
Gm41432 16 20457538 to 20459284 1746 + lncRNA gene predicted gene, 41432
Gm20615 16 20488788 to 20491147 2359 + pseudogene predicted gene 20615
Cpgi8071 16 20498469 to 20499385 916 CpG island CpG island 8071
Tssr137432 16 20498793 to 20498804 11 + TSS region transcription start site region 137432
Eif2b5 16 20498817 to 20509323 10506 + protein coding gene eukaryotic translation initiation factor 2B, subunit 5 epsilon
Tssr137433 16 20498847 to 20498866 19 + TSS region transcription start site region 137433
Tssr137434 16 20498877 to 20498919 42 + TSS region transcription start site region 137434