Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:20121304-20361363

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klhl24 16 20097542 to 20129221 31679 + protein coding gene kelch-like 24
Tssr137421 16 20123602 to 20123606 4 + TSS region transcription start site region 137421
Tssr137422 16 20123821 to 20123838 17 + TSS region transcription start site region 137422
Cpgi8067 16 20140663 to 20141681 1018 CpG island CpG island 8067
Tssr137423 16 20141061 to 20141140 79 + TSS region transcription start site region 137423
Yeats2 16 20141063 to 20232573 91510 + protein coding gene YEATS domain containing 2
Tssr4810 16 20174731 to 20174753 22 + TSS region transcription start site region 4810
Gm10241 16 20176727 to 20177012 285 - pseudogene predicted pseudogene 10241
Tssr137424 16 20186510 to 20186519 9 + TSS region transcription start site region 137424
Tssr137425 16 20186544 to 20186549 5 + TSS region transcription start site region 137425
Tssr137426 16 20186572 to 20186577 5 + TSS region transcription start site region 137426
Tssr137427 16 20188791 to 20188802 11 + TSS region transcription start site region 137427
Tssr137428 16 20188809 to 20188811 2 + TSS region transcription start site region 137428
Tssr137429 16 20188822 to 20188831 9 + TSS region transcription start site region 137429
Bwtn1 16 20200579 to 85803938 65603359 QTL body weight at necropsy 1
D16Mit28 16 20200579 to 20200725 146 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 28
Map6d1 16 20233309 to 20241358 8049 - protein coding gene MAP6 domain containing 1
Gm41431 16 20236647 to 20237512 865 + lncRNA gene predicted gene, 41431
Cpgi8068 16 20240553 to 20241688 1135 CpG island CpG island 8068
Gm49566 16 20241027 to 20242114 1087 + antisense lncRNA gene predicted gene, 49566
Tssr140349 16 20241264 to 20241274 10 - TSS region transcription start site region 140349
Tssr140350 16 20241277 to 20241298 21 - TSS region transcription start site region 140350
Tssr140351 16 20241304 to 20241363 59 - TSS region transcription start site region 140351
Parl 16 20279818 to 20302387 22569 - protein coding gene presenilin associated, rhomboid-like
D16Ertd6e 16 20289236 to 20289435 199 DNA segment DNA segment, Chr 16, ERATO Doi 6, expressed
Tssr140352 16 20292132 to 20292143 11 - TSS region transcription start site region 140352
Tssr140353 16 20301787 to 20301808 21 - TSS region transcription start site region 140353
Tssr140354 16 20301811 to 20301820 9 - TSS region transcription start site region 140354
Cpgi8069 16 20301913 to 20302478 565 CpG island CpG island 8069
Tssr140355 16 20302324 to 20302345 21 - TSS region transcription start site region 140355
Tssr140356 16 20302358 to 20302401 43 - TSS region transcription start site region 140356
Cyp2ab1 16 20308387 to 20325404 17017 - protein coding gene cytochrome P450, family 2, subfamily ab, polypeptide 1
Tssr140357 16 20316802 to 20316805 3 - TSS region transcription start site region 140357
Abcc5 16 20331303 to 20426394 95091 - protein coding gene ATP-binding cassette, sub-family C (CFTR/MRP), member 5
Tssr140358 16 20338672 to 20338684 12 - TSS region transcription start site region 140358
Tssr140359 16 20354710 to 20354719 9 - TSS region transcription start site region 140359
Tssr140360 16 20356177 to 20356207 30 - TSS region transcription start site region 140360
Tssr140361 16 20356293 to 20356322 29 - TSS region transcription start site region 140361