MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:18872037-18975309

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(16Dgcr2-Hira)1Rak	16	17840355 to 18970309	1129954		complex/cluster/region	deletion, Chr 16, Raju Kucherlapati 1
Del(16Dgcr2-Hira)3Aam	16	17840355 to 18970309	1129954		complex/cluster/region	deletion, Chr 16, Alea A Mills 3
Del(16Cldn5-Hira)5Bld	16	18776847 to 18970309	193462		complex/cluster/region	deletion, Chr 16, Antonio Baldini 5
Gm28539	16	18836584 to 18956247	119663	+	protein coding gene	predicted gene 28539
Mrpl40	16	18872018 to 18876637	4619	-	protein coding gene	mitochondrial ribosomal protein L40
Cpgi8063	16	18876294 to 18877960	1666		CpG island	CpG island 8063
Tssr140293	16	18876522 to 18876570	48	-	TSS region	transcription start site region 140293
Tssr140294	16	18876598 to 18876609	11	-	TSS region	transcription start site region 140294
Tssr140295	16	18876619 to 18876653	34	-	TSS region	transcription start site region 140295
Tssr140296	16	18876655 to 18876668	13	-	TSS region	transcription start site region 140296
Tssr137389	16	18876709 to 18876739	30	+	TSS region	transcription start site region 137389
Hira	16	18877037 to 18970309	93272	+	protein coding gene	histone cell cycle regulator
Tssr137390	16	18877213 to 18877241	28	+	TSS region	transcription start site region 137390
Tssr137391	16	18877247 to 18877275	28	+	TSS region	transcription start site region 137391
Tssr137392	16	18893775 to 18893777	2	+	TSS region	transcription start site region 137392
Gm15799	16	18937401 to 18937689	288	+	pseudogene	predicted gene 15799
Gm15798	16	18944258 to 18944665	407	-	pseudogene	predicted gene 15798