Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18398901-18601658

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58 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 complex/cluster/region deletion, Chr 16, Arthur I Skoultchi 1
Dp(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 chromosomal duplication duplication, Chr 16, Arthur I Skoultchi 1
Arvcf 16 18348182 to 18407076 58894 + protein coding gene armadillo repeat gene deleted in velocardiofacial syndrome
Tssr140244 16 18400826 to 18400842 16 - TSS region transcription start site region 140244
Comt 16 18406882 to 18426716 19834 - protein coding gene catechol-O-methyltransferase
Tssr137372 16 18407631 to 18407688 57 + TSS region transcription start site region 137372
Tssr140245 16 18407943 to 18407957 14 - TSS region transcription start site region 140245
Tssr140246 16 18407998 to 18408024 26 - TSS region transcription start site region 140246
Tssr140247 16 18410778 to 18410800 22 - TSS region transcription start site region 140247
Tssr140248 16 18411757 to 18411764 7 - TSS region transcription start site region 140248
Tssr140249 16 18411782 to 18411878 96 - TSS region transcription start site region 140249
Tssr140250 16 18411893 to 18411904 11 - TSS region transcription start site region 140250
Tssr140251 16 18411919 to 18411930 11 - TSS region transcription start site region 140251
Tssr140252 16 18411947 to 18411964 17 - TSS region transcription start site region 140252
Tssr140253 16 18413452 to 18413467 15 - TSS region transcription start site region 140253
D16Jhu32 16 18414626 to 18415012 386 DNA segment DNA segment, Chr 16, Johns Hopkins University 32
Gm15764 16 18416682 to 18421997 5315 + lncRNA gene predicted gene 15764
Cpgi8046 16 18426096 to 18426824 728 CpG island CpG island 8046
Tssr140254 16 18426372 to 18426389 17 - TSS region transcription start site region 140254
Tssr140255 16 18426393 to 18426420 27 - TSS region transcription start site region 140255
Tssr137373 16 18426400 to 18426409 9 + TSS region transcription start site region 137373
Tssr137374 16 18426415 to 18426450 35 + TSS region transcription start site region 137374
Txnrd2 16 18426417 to 18479073 52656 + protein coding gene thioredoxin reductase 2
Tssr140256 16 18426425 to 18426434 9 - TSS region transcription start site region 140256
Tssr140257 16 18426451 to 18426462 11 - TSS region transcription start site region 140257
Tssr140258 16 18426474 to 18426503 29 - TSS region transcription start site region 140258
Tssr140259 16 18426513 to 18426542 29 - TSS region transcription start site region 140259
Tssr140260 16 18426543 to 18426583 40 - TSS region transcription start site region 140260
Tssr140261 16 18426590 to 18426601 11 - TSS region transcription start site region 140261
Tssr140262 16 18426602 to 18426619 17 - TSS region transcription start site region 140262
Tssr137375 16 18428916 to 18428934 18 + TSS region transcription start site region 137375
Tssr137376 16 18428937 to 18428970 33 + TSS region transcription start site region 137376
Tssr137377 16 18428974 to 18429008 34 + TSS region transcription start site region 137377
Tssr137378 16 18429808 to 18429820 12 + TSS region transcription start site region 137378
Tssr140263 16 18460047 to 18460081 34 - TSS region transcription start site region 140263
Gm49588 16 18482056 to 18486545 4489 + unclassified gene predicted gene, 49588
Cpgi8047 16 18498262 to 18499637 1375 CpG island CpG island 8047
Gnb1l 16 18498713 to 18566679 67966 + protein coding gene guanine nucleotide binding protein (G protein), beta polypeptide 1-like
Tssr137379 16 18498784 to 18498816 32 + TSS region transcription start site region 137379
Tssr137380 16 18498865 to 18498942 77 + TSS region transcription start site region 137380
Rtl10 16 18498901 to 18501658 2757 + protein coding gene retrotransposon Gag like 10
Tssr140264 16 18533331 to 18533341 10 - TSS region transcription start site region 140264
Tssr137381 16 18548714 to 18548722 8 + TSS region transcription start site region 137381
Tssr137382 16 18548730 to 18548735 5 + TSS region transcription start site region 137382
Cpgi8048 16 18581276 to 18583233 1957 CpG island CpG island 8048
Tbx1 16 18581704 to 18590671 8967 - protein coding gene T-box 1
Cpgi8049 16 18586075 to 18587294 1219 CpG island CpG island 8049
Tssr140265 16 18586893 to 18586898 5 - TSS region transcription start site region 140265
Tssr140266 16 18586959 to 18586970 11 - TSS region transcription start site region 140266
Tssr140267 16 18586983 to 18587013 30 - TSS region transcription start site region 140267
Cpgi8050 16 18587761 to 18589371 1610 CpG island CpG island 8050
Tssr140268 16 18588198 to 18588208 10 - TSS region transcription start site region 140268
Tssr140269 16 18588772 to 18588784 12 - TSS region transcription start site region 140269
Tssr140270 16 18588818 to 18588832 14 - TSS region transcription start site region 140270
Tssr140271 16 18588880 to 18588909 29 - TSS region transcription start site region 140271
Gm35369 16 18588970 to 18596251 7281 + lncRNA gene predicted gene, 35369
Cpgi8051 16 18590155 to 18591122 967 CpG island CpG island 8051
Cpgi8052 16 18591256 to 18592080 824 CpG island CpG island 8052