Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18387943-18427957

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Del(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 complex/cluster/region deletion, Chr 16, Arthur I Skoultchi 1
Dp(16Dgcr2-Arvcf)1Ais 16 17840355 to 18407076 566721 chromosomal duplication duplication, Chr 16, Arthur I Skoultchi 1
Arvcf 16 18348182 to 18407076 58894 + protein coding gene armadillo repeat gene deleted in velocardiofacial syndrome
Tssr137369 16 18388995 to 18389043 48 + TSS region transcription start site region 137369
Cpgi8045 16 18392398 to 18393151 753 CpG island CpG island 8045
Tssr137370 16 18392554 to 18392622 68 + TSS region transcription start site region 137370
Tssr137371 16 18392631 to 18392643 12 + TSS region transcription start site region 137371
Tssr140244 16 18400826 to 18400842 16 - TSS region transcription start site region 140244
Comt 16 18406882 to 18426716 19834 - protein coding gene catechol-O-methyltransferase
Tssr137372 16 18407631 to 18407688 57 + TSS region transcription start site region 137372
Tssr140245 16 18407943 to 18407957 14 - TSS region transcription start site region 140245
Tssr140246 16 18407998 to 18408024 26 - TSS region transcription start site region 140246
Tssr140247 16 18410778 to 18410800 22 - TSS region transcription start site region 140247
Tssr140248 16 18411757 to 18411764 7 - TSS region transcription start site region 140248
Tssr140249 16 18411782 to 18411878 96 - TSS region transcription start site region 140249
Tssr140250 16 18411893 to 18411904 11 - TSS region transcription start site region 140250
Tssr140251 16 18411919 to 18411930 11 - TSS region transcription start site region 140251
Tssr140252 16 18411947 to 18411964 17 - TSS region transcription start site region 140252
Tssr140253 16 18413452 to 18413467 15 - TSS region transcription start site region 140253
D16Jhu32 16 18414626 to 18415012 386 DNA segment DNA segment, Chr 16, Johns Hopkins University 32
Gm15764 16 18416682 to 18421997 5315 + lncRNA gene predicted gene 15764
Cpgi8046 16 18426096 to 18426824 728 CpG island CpG island 8046
Tssr140254 16 18426372 to 18426389 17 - TSS region transcription start site region 140254
Tssr140255 16 18426393 to 18426420 27 - TSS region transcription start site region 140255
Tssr137373 16 18426400 to 18426409 9 + TSS region transcription start site region 137373
Tssr137374 16 18426415 to 18426450 35 + TSS region transcription start site region 137374
Txnrd2 16 18426417 to 18479073 52656 + protein coding gene thioredoxin reductase 2
Tssr140256 16 18426425 to 18426434 9 - TSS region transcription start site region 140256
Tssr140257 16 18426451 to 18426462 11 - TSS region transcription start site region 140257
Tssr140258 16 18426474 to 18426503 29 - TSS region transcription start site region 140258
Tssr140259 16 18426513 to 18426542 29 - TSS region transcription start site region 140259
Tssr140260 16 18426543 to 18426583 40 - TSS region transcription start site region 140260
Tssr140261 16 18426590 to 18426601 11 - TSS region transcription start site region 140261
Tssr140262 16 18426602 to 18426619 17 - TSS region transcription start site region 140262