Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:18243948-18299246

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ranbp1 16 18239979 to 18248694 8715 - protein coding gene RAN binding protein 1
Gm49776 16 18245215 to 18258321 13106 - protein coding gene predicted gene, 49776
Tssr140232 16 18245225 to 18245238 13 - TSS region transcription start site region 140232
Tssr140233 16 18247366 to 18247387 21 - TSS region transcription start site region 140233
Tssr140234 16 18247404 to 18247419 15 - TSS region transcription start site region 140234
Cpgi8041 16 18248012 to 18250020 2008 CpG island CpG island 8041
Tssr140235 16 18248611 to 18248692 81 - TSS region transcription start site region 140235
Tssr140236 16 18248697 to 18248709 12 - TSS region transcription start site region 140236
Tssr140237 16 18248727 to 18248744 17 - TSS region transcription start site region 140237
Trmt2a 16 18248858 to 18254772 5914 + protein coding gene TRM2 tRNA methyltransferase 2A
Tssr137364 16 18248866 to 18248919 53 + TSS region transcription start site region 137364
Tssr137365 16 18248937 to 18248948 11 + TSS region transcription start site region 137365
Tssr137366 16 18248961 to 18249041 80 + TSS region transcription start site region 137366
Tssr140238 16 18249231 to 18249253 22 - TSS region transcription start site region 140238
Dgcr8 16 18253948 to 18289246 35298 - protein coding gene DGCR8, microprocessor complex subunit
Mir1306 16 18284239 to 18284317 78 - miRNA gene microRNA 1306
Gm24572 16 18284550 to 18284637 87 - miRNA gene predicted gene, 24572
Tssr140239 16 18284951 to 18284955 4 - TSS region transcription start site region 140239
Cpgi8042 16 18288629 to 18289574 945 CpG island CpG island 8042
Tssr140240 16 18289186 to 18289196 10 - TSS region transcription start site region 140240
Tssr140241 16 18289199 to 18289260 61 - TSS region transcription start site region 140241