Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:17896997-17958732

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22 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr137344 16 17898617 to 17898647 30 + TSS region transcription start site region 137344
Tssk2 16 17898637 to 17900024 1387 + protein coding gene testis-specific serine kinase 2
Tssr137345 16 17898648 to 17898673 25 + TSS region transcription start site region 137345
Ess2 16 17900709 to 17911348 10639 - protein coding gene ess-2 splicing factor
Cpgi8031 16 17911099 to 17911441 342 CpG island CpG island 8031
Tssr140219 16 17911303 to 17911354 51 - TSS region transcription start site region 140219
Gsc2 16 17913554 to 17915059 1505 - protein coding gene goosecoid homebox 2
Cpgi8032 16 17914140 to 17915350 1210 CpG island CpG island 8032
Cpgi8033 16 17920598 to 17920894 296 CpG island CpG island 8033
Cpgi8034 16 17921421 to 17922504 1083 CpG island CpG island 8034
Tssr140220 16 17921902 to 17921922 20 - TSS region transcription start site region 140220
Tssr140221 16 17921924 to 17921944 20 - TSS region transcription start site region 140221
Tssr137346 16 17922041 to 17922076 35 + TSS region transcription start site region 137346
AA914427 16 17922043 to 17923208 1165 + unclassified gene EST AA914427
Slc25a1 16 17925223 to 17928219 2996 - protein coding gene solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1
Tssr140222 16 17925699 to 17925713 14 - TSS region transcription start site region 140222
Tssr140223 16 17925761 to 17925799 38 - TSS region transcription start site region 140223
Cpgi8035 16 17926997 to 17928732 1735 CpG island CpG island 8035
Tssr140224 16 17927829 to 17927871 42 - TSS region transcription start site region 140224
Tssr140225 16 17928018 to 17928022 4 - TSS region transcription start site region 140225
Tssr140226 16 17928136 to 17928215 79 - TSS region transcription start site region 140226
Gm41427 16 17936110 to 17944289 8179 + lncRNA gene predicted gene, 41427