Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:17509489-17729498

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lztr1 16 17508688 to 17526333 17645 + protein coding gene leucine-zipper-like transcriptional regulator, 1
Tssr137310 16 17511060 to 17511090 30 + TSS region transcription start site region 137310
Thap7 16 17527982 to 17531136 3154 - protein coding gene THAP domain containing 7
Cpgi8017 16 17530092 to 17531395 1303 CpG island CpG island 8017
Tssr140190 16 17530688 to 17530789 101 - TSS region transcription start site region 140190
Tssr140191 16 17530993 to 17531016 23 - TSS region transcription start site region 140191
Tssr140192 16 17531019 to 17531071 52 - TSS region transcription start site region 140192
Tssr140193 16 17531132 to 17531143 11 - TSS region transcription start site region 140193
Tssr137311 16 17531155 to 17531190 35 + TSS region transcription start site region 137311
Gm49785 16 17531182 to 17531518 336 + bidirectional promoter lncRNA gene predicted gene, 49785
Lrrc74b 16 17544465 to 17561247 16782 - protein coding gene leucine rich repeat containing 74B
Tssr140194 16 17554806 to 17554814 8 - TSS region transcription start site region 140194
Tssr140195 16 17561240 to 17561254 14 - TSS region transcription start site region 140195
P2rx6 16 17561855 to 17572012 10157 + protein coding gene purinergic receptor P2X, ligand-gated ion channel, 6
Tssr137312 16 17561992 to 17562042 50 + TSS region transcription start site region 137312
Slc7a4 16 17572018 to 17576893 4875 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 4
Tssr140196 16 17576169 to 17576183 14 - TSS region transcription start site region 140196
Tssr140197 16 17576216 to 17576237 21 - TSS region transcription start site region 140197
Cpgi8018 16 17576275 to 17576969 694 CpG island CpG island 8018
Tssr140198 16 17576661 to 17576698 37 - TSS region transcription start site region 140198
Tssr137313 16 17581186 to 17581188 2 + TSS region transcription start site region 137313
Cpgi8019 16 17619275 to 17620144 869 CpG island CpG island 8019
Tssr137314 16 17619341 to 17619387 46 + TSS region transcription start site region 137314
Smpd4 16 17619354 to 17644828 25474 + protein coding gene sphingomyelin phosphodiesterase 4
Tssr137315 16 17619443 to 17619450 7 + TSS region transcription start site region 137315
Tssr137316 16 17619470 to 17619479 9 + TSS region transcription start site region 137316
Tssr137317 16 17619489 to 17619498 9 + TSS region transcription start site region 137317
Tssr137318 16 17619503 to 17619514 11 + TSS region transcription start site region 137318
Tssr137319 16 17619530 to 17619548 18 + TSS region transcription start site region 137319
Tssr137320 16 17640874 to 17640923 49 + TSS region transcription start site region 137320
Cpgi8020 16 17646031 to 17646991 960 CpG island CpG island 8020
Tssr137321 16 17646446 to 17646458 12 + TSS region transcription start site region 137321
Tssr137322 16 17646464 to 17646507 43 + TSS region transcription start site region 137322
Ccdc74a 16 17646470 to 17650738 4268 + protein coding gene coiled-coil domain containing 74A
Tssr137323 16 17646513 to 17646530 17 + TSS region transcription start site region 137323
Tssr137324 16 17646592 to 17646620 28 + TSS region transcription start site region 137324
Tssr137325 16 17646703 to 17646709 6 + TSS region transcription start site region 137325
Med15 16 17651208 to 17722947 71739 - protein coding gene mediator complex subunit 15
Tssr140199 16 17654679 to 17654686 7 - TSS region transcription start site region 140199
Tssr140200 16 17655553 to 17655580 27 - TSS region transcription start site region 140200
Tssr140201 16 17663443 to 17663475 32 - TSS region transcription start site region 140201
Tssr140202 16 17673185 to 17673284 99 - TSS region transcription start site region 140202
Tssr140203 16 17673312 to 17673335 23 - TSS region transcription start site region 140203
Tssr140204 16 17680612 to 17680631 19 - TSS region transcription start site region 140204
Tssr140205 16 17691627 to 17691631 4 - TSS region transcription start site region 140205
Gm18335 16 17702935 to 17703591 656 + pseudogene predicted gene, 18335
Gm49684 16 17704343 to 17705100 757 + pseudogene predicted gene, 49684
Tssr140206 16 17704388 to 17704399 11 - TSS region transcription start site region 140206
Tssr140207 16 17704400 to 17704409 9 - TSS region transcription start site region 140207
Tssr137326 16 17704584 to 17704600 16 + TSS region transcription start site region 137326
Tssr137327 16 17711623 to 17711651 28 + TSS region transcription start site region 137327
Rpl26-ps4 16 17711668 to 17712105 437 + pseudogene ribosomal protein L26, pseudogene 4
Gm49683 16 17714861 to 17715139 278 + pseudogene predicted gene, 49683
Tssr140208 16 17722452 to 17722466 14 - TSS region transcription start site region 140208
Tssr140209 16 17722468 to 17722508 40 - TSS region transcription start site region 140209
Cpgi8021 16 17722471 to 17723011 540 CpG island CpG island 8021
Tssr137328 16 17722554 to 17722600 46 + TSS region transcription start site region 137328
Tssr140210 16 17722879 to 17722936 57 - TSS region transcription start site region 140210
Tssr140211 16 17722941 to 17722954 13 - TSS region transcription start site region 140211
Gm6048 16 17725376 to 17725685 309 + pseudogene predicted gene 6048