MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:16123325-16303364

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Spidr	16	15889224 to 16146851	257627	-	protein coding gene	scaffolding protein involved in DNA repair
Cpgi7993	16	16146349 to 16147104	755		CpG island	CpG island 7993
Tssr140116	16	16146771 to 16146836	65	-	TSS region	transcription start site region 140116
Rpl29-ps4	16	16158214 to 16158865	651	+	pseudogene	ribosomal protein L29, pseudogene 4
D16Ertd727e	16	16196302 to 16198747	2445	-	pseudogene	DNA segment, Chr 16, ERATO Doi 727, expressed
Cpgi7994	16	16213033 to 16213830	797		CpG island	CpG island 7994
Tssr137236	16	16213122 to 16213138	16	+	TSS region	transcription start site region 137236
Tssr137237	16	16213325 to 16213364	39	+	TSS region	transcription start site region 137237
Pkp2	16	16213345 to 16272712	59367	+	protein coding gene	plakophilin 2
Cpgi7995	16	16225850 to 16226320	470		CpG island	CpG island 7995
Tssr137238	16	16232428 to 16232432	4	+	TSS region	transcription start site region 137238
Tssr137239	16	16269681 to 16269689	8	+	TSS region	transcription start site region 137239
Gm5481	16	16275603 to 16275947	344	+	protein coding gene	predicted gene 5481
Tssr140117	16	16292034 to 16292038	4	-	TSS region	transcription start site region 140117
Cpgi7996	16	16302545 to 16303799	1254		CpG island	CpG island 7996
Tssr137240	16	16302955 to 16302987	32	+	TSS region	transcription start site region 137240
Yars2	16	16302965 to 16309640	6675	+	protein coding gene	tyrosyl-tRNA synthetase 2 (mitochondrial)
Tssr137241	16	16303018 to 16303029	11	+	TSS region	transcription start site region 137241