Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:15110234-15909006

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53 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm41423 16 15101376 to 15114218 12842 - lncRNA gene predicted gene, 41423
Tssr140092 16 15114100 to 15114132 32 - TSS region transcription start site region 140092
Gm7731 16 15216859 to 15217328 469 - pseudogene predicted gene 7731
Gm5404 16 15218844 to 15221508 2664 + pseudogene predicted gene 5404
Tssr4801 16 15301395 to 15301405 10 - TSS region transcription start site region 4801
Gm21897 16 15317458 to 15318957 1499 + protein coding gene predicted gene, 21897
Tssr137222 16 15345534 to 15345535 1 + TSS region transcription start site region 137222
D16Mit56 16 15365376 to 15365459 83 DNA segment DNA segment, Chr 16, Massachusetts Institute of Technology 56
Gm6031 16 15426151 to 15427204 1053 + pseudogene predicted gene 6031
Gm7085 16 15452004 to 15452762 758 + pseudogene predicted gene 7085
Gm41424 16 15490234 to 15529006 38772 - lncRNA gene predicted gene, 41424
Ube2v2 16 15550986 to 15594518 43532 - protein coding gene ubiquitin-conjugating enzyme E2 variant 2
Tssr140093 16 15564710 to 15564716 6 - TSS region transcription start site region 140093
Gm49538 16 15587365 to 15588059 694 + pseudogene predicted gene, 49538
Cpgi7989 16 15594020 to 15594665 645 CpG island CpG island 7989
Tssr140094 16 15594473 to 15594503 30 - TSS region transcription start site region 140094
Tssr140095 16 15594509 to 15594531 22 - TSS region transcription start site region 140095
Tssr137223 16 15604480 to 15604488 8 + TSS region transcription start site region 137223
Gm7748 16 15609107 to 15609515 408 + pseudogene predicted gene 7748
Mcm4 16 15623897 to 15637400 13503 - protein coding gene minichromosome maintenance complex component 4
Tssr140096 16 15626273 to 15626277 4 - TSS region transcription start site region 140096
Cpgi7990 16 15636680 to 15638278 1598 CpG island CpG island 7990
Tssr140097 16 15636729 to 15636748 19 - TSS region transcription start site region 140097
Tssr140098 16 15637277 to 15637385 108 - TSS region transcription start site region 140098
Tssr137224 16 15637844 to 15637884 40 + TSS region transcription start site region 137224
Prkdc 16 15637866 to 15842235 204369 + protein coding gene protein kinase, DNA activated, catalytic polypeptide
Tssr137225 16 15705225 to 15705249 24 + TSS region transcription start site region 137225
Tssr140099 16 15736677 to 15736679 2 - TSS region transcription start site region 140099
Gm49511 16 15750923 to 15751192 269 + pseudogene predicted gene, 49511
Mzt2 16 15848441 to 15863364 14923 - protein coding gene mitotic spindle organizing protein 2
Cpgi7991 16 15862453 to 15863570 1117 CpG island CpG island 7991
Tssr140100 16 15862923 to 15862951 28 - TSS region transcription start site region 140100
Tssr140101 16 15863119 to 15863126 7 - TSS region transcription start site region 140101
Tssr140102 16 15863223 to 15863238 15 - TSS region transcription start site region 140102
Tssr140103 16 15863263 to 15863273 10 - TSS region transcription start site region 140103
Tssr140104 16 15863293 to 15863339 46 - TSS region transcription start site region 140104
Tssr140105 16 15863354 to 15863359 5 - TSS region transcription start site region 140105
Gm41425 16 15863448 to 15877478 14030 + lncRNA gene predicted gene, 41425
Gm20082 16 15871829 to 15872159 330 + pseudogene predicted gene, 20082
Tssr140106 16 15885621 to 15885629 8 - TSS region transcription start site region 140106
Cpgi7992 16 15886654 to 15888596 1942 CpG island CpG island 7992
Tssr140107 16 15887131 to 15887161 30 - TSS region transcription start site region 140107
Tssr137226 16 15887278 to 15887292 14 + TSS region transcription start site region 137226
Cebpd 16 15887286 to 15889545 2259 + protein coding gene CCAAT/enhancer binding protein (C/EBP), delta
Tssr137227 16 15887448 to 15887461 13 + TSS region transcription start site region 137227
Tssr137228 16 15887776 to 15887800 24 + TSS region transcription start site region 137228
Tssr137229 16 15888135 to 15888152 17 + TSS region transcription start site region 137229
Spidr 16 15889224 to 16146851 257627 - protein coding gene scaffolding protein involved in DNA repair
Tssr137230 16 15892236 to 15892239 3 + TSS region transcription start site region 137230
Tssr140108 16 15895707 to 15895721 14 - TSS region transcription start site region 140108
Tssr140109 16 15895724 to 15895732 8 - TSS region transcription start site region 140109
Tssr140110 16 15895765 to 15895795 30 - TSS region transcription start site region 140110
Tssr140111 16 15895797 to 15895804 7 - TSS region transcription start site region 140111