MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:14756376-15459218

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm49530	16	14790417 to 14791011	594	-	pseudogene	predicted gene, 49530
Gm25547	16	14807163 to 14807269	106	-	snRNA gene	predicted gene, 25547
Gm33696	16	14892467 to 14949676	57209	-	antisense lncRNA gene	predicted gene, 33696
Efcab1	16	14906260 to 14965910	59650	+	protein coding gene	EF-hand calcium binding domain 1
Tssr137221	16	14906622 to 14906680	58	+	TSS region	transcription start site region 137221
Gm46561	16	14957623 to 14958505	882	-	pseudogene	predicted gene, 46561
Gm49536	16	15000322 to 15000489	167	+	pseudogene	predicted gene, 49536
Cpgi7988	16	15084477 to 15085325	848		CpG island	CpG island 7988
F830005K03Rik	16	15092428 to 15095785	3357	-	unclassified gene	RIKEN cDNA F830005K03 gene
Gm41423	16	15101376 to 15114218	12842	-	lncRNA gene	predicted gene, 41423
Tssr140092	16	15114100 to 15114132	32	-	TSS region	transcription start site region 140092
Gm7731	16	15216859 to 15217328	469	-	pseudogene	predicted gene 7731
Gm5404	16	15218844 to 15221508	2664	+	pseudogene	predicted gene 5404
Tssr4801	16	15301395 to 15301405	10	-	TSS region	transcription start site region 4801
Gm21897	16	15317458 to 15318957	1499	+	protein coding gene	predicted gene, 21897
Tssr137222	16	15345534 to 15345535	1	+	TSS region	transcription start site region 137222
D16Mit56	16	15365376 to 15365459	83		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 56
Gm6031	16	15426151 to 15427204	1053	+	pseudogene	predicted gene 6031
Gm7085	16	15452004 to 15452762	758	+	pseudogene	predicted gene 7085