Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:13253442-13463453

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7970 16 13255944 to 13257204 1260 CpG island CpG island 7970
Mrtfb 16 13256481 to 13417529 161048 + protein coding gene myocardin related transcription factor B
Tssr137125 16 13256485 to 13256526 41 + TSS region transcription start site region 137125
Tssr137126 16 13266423 to 13266429 6 + TSS region transcription start site region 137126
Tssr137127 16 13322501 to 13322506 5 + TSS region transcription start site region 137127
Tssr137128 16 13348943 to 13348947 4 + TSS region transcription start site region 137128
Tssr137129 16 13358141 to 13358190 49 + TSS region transcription start site region 137129
Tssr137130 16 13358375 to 13358439 64 + TSS region transcription start site region 137130
Tssr137131 16 13358442 to 13358453 11 + TSS region transcription start site region 137131
Tssr137132 16 13358455 to 13358469 14 + TSS region transcription start site region 137132
Gm15738 16 13392408 to 13406588 14180 - antisense lncRNA gene predicted gene 15738
Tssr137133 16 13392419 to 13392420 1 + TSS region transcription start site region 137133
Tssr137134 16 13401073 to 13401089 16 + TSS region transcription start site region 137134
Tssr137135 16 13401100 to 13401114 14 + TSS region transcription start site region 137135
Tssr140038 16 13419847 to 13419851 4 - TSS region transcription start site region 140038
Tssr140039 16 13423722 to 13423743 21 - TSS region transcription start site region 140039
Gm41421 16 13436491 to 13440201 3710 + lncRNA gene predicted gene, 41421
Cpgi7971 16 13436839 to 13438065 1226 CpG island CpG island 7971
n-TTcgt5 16 13437323 to 13437394 71 + tRNA gene nuclear encoded tRNA threonine 5 (anticodon CGT)
Cpgi7972 16 13447310 to 13448795 1485 CpG island CpG island 7972
Tssr137136 16 13447714 to 13447719 5 + TSS region transcription start site region 137136
Tssr137137 16 13447941 to 13447967 26 + TSS region transcription start site region 137137
Tssr137138 16 13447972 to 13447994 22 + TSS region transcription start site region 137138
Mir193b 16 13449523 to 13449601 78 + miRNA gene microRNA 193b
Mir365-1 16 13453840 to 13453926 86 + miRNA gene microRNA 365-1
Gm32817 16 13462546 to 13467237 4691 + lncRNA gene predicted gene, 32817