MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:11518169-11861857

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Snx29	16	11322908 to 11755472	432564	+	protein coding gene	sorting nexin 29
5830487K18Rik	16	11549741 to 11551159	1418		unclassified gene	RIKEN cDNA 5830487K18 gene
Gm32100	16	11583706 to 11588531	4825	+	lncRNA gene	predicted gene, 32100
Tssr137105	16	11584508 to 11584513	5	+	TSS region	transcription start site region 137105
Tssr137106	16	11615880 to 11615902	22	+	TSS region	transcription start site region 137106
Dice1	16	11616382 to 11616494	112		QTL	determination of interleukin 4 commitment 1
D16Mit81	16	11616382 to 11616494	112		DNA segment	DNA segment, Chr 16, Massachusetts Institute of Technology 81
Tssr137107	16	11632081 to 11632085	4	+	TSS region	transcription start site region 137107
Tssr140027	16	11633171 to 11633177	6	-	TSS region	transcription start site region 140027
Tssr137108	16	11644708 to 11644749	41	+	TSS region	transcription start site region 137108
Tssr137109	16	11656117 to 11656137	20	+	TSS region	transcription start site region 137109
Tssr137110	16	11656144 to 11656155	11	+	TSS region	transcription start site region 137110
Gm4279	16	11688169 to 11691857	3688	-	antisense lncRNA gene	predicted gene 4279
Tssr137111	16	11778448 to 11778465	17	+	TSS region	transcription start site region 137111
4833415N18Rik	16	11779702 to 11781501	1799	+	lincRNA gene	RIKEN cDNA 4833415N18 gene
Cpped1	16	11803721 to 11909445	105724	-	protein coding gene	calcineurin-like phosphoesterase domain containing 1
Tssr140028	16	11804985 to 11804998	13	-	TSS region	transcription start site region 140028