MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:11173037-11223292

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Zc3h7a	16	11136594 to 11176393	39799	-	protein coding gene	zinc finger CCCH type containing 7 A
Tssr140002	16	11175521 to 11175571	50	-	TSS region	transcription start site region 140002
Cpgi7961	16	11175522 to 11177145	1623		CpG island	CpG island 7961
Tssr140003	16	11176025 to 11176038	13	-	TSS region	transcription start site region 140003
Tssr140004	16	11176056 to 11176070	14	-	TSS region	transcription start site region 140004
Tssr137079	16	11176195 to 11176220	25	+	TSS region	transcription start site region 137079
Tssr140005	16	11176251 to 11176260	9	-	TSS region	transcription start site region 140005
Tssr140006	16	11176270 to 11176365	95	-	TSS region	transcription start site region 140006
4930509G22Rik	16	11176342 to 11180565	4223	+	lincRNA gene	RIKEN cDNA 4930509G22 gene
Gm7638	16	11185100 to 11185896	796	-	pseudogene	predicted gene 7638
Gm6305	16	11190253 to 11191259	1006	-	pseudogene	predicted gene 6305
Rsl1d1	16	11193037 to 11203292	10255	-	protein coding gene	ribosomal L1 domain containing 1
Tssr140007	16	11200379 to 11200384	5	-	TSS region	transcription start site region 140007
Cpgi7962	16	11202805 to 11203852	1047		CpG island	CpG island 7962
Tssr140008	16	11203259 to 11203312	53	-	TSS region	transcription start site region 140008
Tssr137080	16	11203375 to 11203448	73	+	TSS region	transcription start site region 137080
2610020C07Rik	16	11203383 to 11225796	22413	+	antisense lncRNA gene	RIKEN cDNA 2610020C07 gene
Gspt1	16	11219292 to 11254325	35033	-	protein coding gene	G1 to S phase transition 1