Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 16:11148037-11248292

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zc3h7a 16 11136594 to 11176393 39799 - protein coding gene zinc finger CCCH type containing 7 A
Tssr139999 16 11150133 to 11150137 4 - TSS region transcription start site region 139999
Tssr140000 16 11151731 to 11151765 34 - TSS region transcription start site region 140000
Tssr140001 16 11155096 to 11155115 19 - TSS region transcription start site region 140001
Gm24145 16 11167105 to 11167267 162 - snRNA gene predicted gene, 24145
Tssr140002 16 11175521 to 11175571 50 - TSS region transcription start site region 140002
Cpgi7961 16 11175522 to 11177145 1623 CpG island CpG island 7961
Tssr140003 16 11176025 to 11176038 13 - TSS region transcription start site region 140003
Tssr140004 16 11176056 to 11176070 14 - TSS region transcription start site region 140004
Tssr137079 16 11176195 to 11176220 25 + TSS region transcription start site region 137079
Tssr140005 16 11176251 to 11176260 9 - TSS region transcription start site region 140005
Tssr140006 16 11176270 to 11176365 95 - TSS region transcription start site region 140006
4930509G22Rik 16 11176342 to 11180565 4223 + lincRNA gene RIKEN cDNA 4930509G22 gene
Gm7638 16 11185100 to 11185896 796 - pseudogene predicted gene 7638
Gm6305 16 11190253 to 11191259 1006 - pseudogene predicted gene 6305
Rsl1d1 16 11193037 to 11203292 10255 - protein coding gene ribosomal L1 domain containing 1
Tssr140007 16 11200379 to 11200384 5 - TSS region transcription start site region 140007
Cpgi7962 16 11202805 to 11203852 1047 CpG island CpG island 7962
Tssr140008 16 11203259 to 11203312 53 - TSS region transcription start site region 140008
Tssr137080 16 11203375 to 11203448 73 + TSS region transcription start site region 137080
2610020C07Rik 16 11203383 to 11225796 22413 + antisense lncRNA gene RIKEN cDNA 2610020C07 gene
Gspt1 16 11219292 to 11254325 35033 - protein coding gene G1 to S phase transition 1
Tssr140009 16 11227561 to 11227567 6 - TSS region transcription start site region 140009