MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 16:10988464-11028493

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Litaf	16	10959273 to 10993121	33848	-	protein coding gene	LPS-induced TN factor
Tssr139986	16	10992144 to 10992190	46	-	TSS region	transcription start site region 139986
Cpgi7957	16	10992269 to 10993435	1166		CpG island	CpG island 7957
Tssr4794	16	10992335 to 10992354	19	+	TSS region	transcription start site region 4794
Tssr139987	16	10992644 to 10992665	21	-	TSS region	transcription start site region 139987
Tssr139988	16	10993070 to 10993094	24	-	TSS region	transcription start site region 139988
Tssr139989	16	10993100 to 10993111	11	-	TSS region	transcription start site region 139989
Tssr139990	16	10993135 to 10993138	3	-	TSS region	transcription start site region 139990
Gm24961	16	10994386 to 10994569	183	+	snRNA gene	predicted gene, 24961
Tssr139991	16	11006070 to 11006109	39	-	TSS region	transcription start site region 139991
Tssr137066	16	11008464 to 11008493	29	+	TSS region	transcription start site region 137066
Gm4262	16	11008898 to 11015184	6286	+	lincRNA gene	predicted gene 4262
Tssr137067	16	11008935 to 11008946	11	+	TSS region	transcription start site region 137067
Tssr137068	16	11011510 to 11011551	41	+	TSS region	transcription start site region 137068
Tssr139992	16	11021516 to 11021556	40	-	TSS region	transcription start site region 139992
Tssr137069	16	11021643 to 11021682	39	+	TSS region	transcription start site region 137069
Tssr4795	16	11022148 to 11022151	3	-	TSS region	transcription start site region 4795
Tssr137070	16	11022322 to 11022332	10	+	TSS region	transcription start site region 137070