Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:98985106-99095370

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi7686 15 98985523 to 98985939 416 CpG island CpG island 7686
Tssr136344 15 98985767 to 98985779 12 - TSS region transcription start site region 136344
Tssr136345 15 98985822 to 98985843 21 - TSS region transcription start site region 136345
4930578M01Rik 15 98985965 to 98989281 3316 + lncRNA gene RIKEN cDNA 4930578M01 gene
Tssr136346 15 98989864 to 98989876 12 - TSS region transcription start site region 136346
Tssr132977 15 98990000 to 98990017 17 + TSS region transcription start site region 132977
Tssr136347 15 98992602 to 98992613 11 - TSS region transcription start site region 136347
Tssr132978 15 98992800 to 98992814 14 + TSS region transcription start site region 132978
Cpgi7687 15 98993077 to 98993610 533 CpG island CpG island 7687
Tssr132979 15 98993250 to 98993289 39 + TSS region transcription start site region 132979
Gm8973 15 99006057 to 99006369 312 + pseudogene predicted gene 8973
Gm41398 15 99015369 to 99024411 9042 - lncRNA gene predicted gene, 41398
Cpgi7688 15 99029793 to 99030893 1100 CpG island CpG island 7688
Tssr132980 15 99029866 to 99029913 47 + TSS region transcription start site region 132980
Tuba1c 15 99029891 to 99038105 8214 + protein coding gene tubulin, alpha 1C
Tssr132981 15 99029915 to 99029924 9 + TSS region transcription start site region 132981
Tssr132982 15 99029928 to 99029949 21 + TSS region transcription start site region 132982
Tssr132983 15 99030287 to 99030297 10 + TSS region transcription start site region 132983
Tssr132984 15 99030312 to 99030328 16 + TSS region transcription start site region 132984
Tssr132985 15 99030377 to 99030397 20 + TSS region transcription start site region 132985
Tssr132986 15 99030856 to 99030868 12 + TSS region transcription start site region 132986
Tssr132987 15 99033747 to 99033756 9 + TSS region transcription start site region 132987
Cpgi7689 15 99040106 to 99040370 264 CpG island CpG island 7689
Gm41399 15 99041236 to 99051157 9921 + lncRNA gene predicted gene, 41399
D15Jcs28 15 99047824 to 99048119 295 DNA segment DNA segment, Chr 15, John C. Schimenti 28
Cpgi7690 15 99054932 to 99057518 2586 CpG island CpG island 7690
Tssr132988 15 99055164 to 99055183 19 + TSS region transcription start site region 132988
Prph 15 99055174 to 99058978 3804 + protein coding gene peripherin
Tssr132989 15 99055895 to 99055916 21 + TSS region transcription start site region 132989
D15Mit42 15 99056585 to 99056770 185 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 42
Gm34284 15 99068138 to 99074669 6531 - antisense lncRNA gene predicted gene, 34284
Cpgi7691 15 99074529 to 99075231 702 CpG island CpG island 7691
Tssr132990 15 99074968 to 99075005 37 + TSS region transcription start site region 132990
Troap 15 99074973 to 99083409 8436 + protein coding gene trophinin associated protein
Tssr132991 15 99075006 to 99075022 16 + TSS region transcription start site region 132991
Mir6960 15 99080805 to 99080865 60 + miRNA gene microRNA 6960
C1ql4 15 99084086 to 99087817 3731 - protein coding gene complement component 1, q subcomponent-like 4
Cpgi7692 15 99084618 to 99084935 317 CpG island CpG island 7692
Cpgi7693 15 99087093 to 99088622 1529 CpG island CpG island 7693
Tssr136348 15 99088426 to 99088429 3 - TSS region transcription start site region 136348
Cpgi7694 15 99093232 to 99094228 996 CpG island CpG island 7694
Cpgi7695 15 99094821 to 99095274 453 CpG island CpG island 7695