Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:98562871-98762911

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81 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccnt1 15 98542768 to 98567772 25004 - protein coding gene cyclin T1
Tssr136247 15 98564438 to 98564442 4 - TSS region transcription start site region 136247
Cpgi7656 15 98567105 to 98568253 1148 CpG island CpG island 7656
Tssr132943 15 98567288 to 98567328 40 + TSS region transcription start site region 132943
9330020H09Rik 15 98567324 to 98569583 2259 + antisense lncRNA gene RIKEN cDNA 9330020H09 gene
Tssr136248 15 98567509 to 98567516 7 - TSS region transcription start site region 136248
Tssr136249 15 98567562 to 98567573 11 - TSS region transcription start site region 136249
Tssr136250 15 98567589 to 98567620 31 - TSS region transcription start site region 136250
Tssr136251 15 98567630 to 98567748 118 - TSS region transcription start site region 136251
Tssr136252 15 98567762 to 98567776 14 - TSS region transcription start site region 136252
Tssr132944 15 98567961 to 98567980 19 + TSS region transcription start site region 132944
Tssr132945 15 98567996 to 98568018 22 + TSS region transcription start site region 132945
Tssr132946 15 98568022 to 98568036 14 + TSS region transcription start site region 132946
4930415O20Rik 15 98571004 to 98589580 18576 + protein coding gene RIKEN cDNA 4930415O20 gene
Tssr132947 15 98571007 to 98571026 19 + TSS region transcription start site region 132947
Tssr132948 15 98571040 to 98571045 5 + TSS region transcription start site region 132948
Tssr132949 15 98571049 to 98571059 10 + TSS region transcription start site region 132949
Adcy6 15 98589973 to 98610076 20103 - protein coding gene adenylate cyclase 6
Gm29331 15 98589990 to 98591090 1100 + antisense lncRNA gene predicted gene 29331
Tssr136253 15 98593638 to 98593641 3 - TSS region transcription start site region 136253
Cpgi7657 15 98604277 to 98604732 455 CpG island CpG island 7657
D15Bwg0340e 15 98606432 to 98606707 275 DNA segment DNA segment, Chr 15, Brigham & Women's Genetics 0340 expressed
Tssr136254 15 98607483 to 98607494 11 - TSS region transcription start site region 136254
Tssr136255 15 98607611 to 98607638 27 - TSS region transcription start site region 136255
Cpgi7658 15 98608733 to 98610143 1410 CpG island CpG island 7658
Tssr136256 15 98609029 to 98609046 17 - TSS region transcription start site region 136256
Tssr136257 15 98609314 to 98609344 30 - TSS region transcription start site region 136257
Tssr136258 15 98609402 to 98609424 22 - TSS region transcription start site region 136258
Tssr136259 15 98609709 to 98609744 35 - TSS region transcription start site region 136259
Tssr136260 15 98609904 to 98609932 28 - TSS region transcription start site region 136260
Tssr136261 15 98610070 to 98610110 40 - TSS region transcription start site region 136261
Tssr4712 15 98610236 to 98610239 3 - TSS region transcription start site region 4712
Tssr132950 15 98626631 to 98626641 10 + TSS region transcription start site region 132950
Tssr132951 15 98626680 to 98626687 7 + TSS region transcription start site region 132951
Cacnb3 15 98630840 to 98644529 13689 + protein coding gene calcium channel, voltage-dependent, beta 3 subunit
Cpgi7659 15 98631188 to 98631908 720 CpG island CpG island 7659
Cpgi7660 15 98632199 to 98632588 389 CpG island CpG island 7660
Tssr132952 15 98632345 to 98632390 45 + TSS region transcription start site region 132952
Tssr132953 15 98632393 to 98632411 18 + TSS region transcription start site region 132953
Cpgi7661 15 98633924 to 98635783 1859 CpG island CpG island 7661
Tssr132954 15 98634730 to 98634735 5 + TSS region transcription start site region 132954
Tssr132955 15 98634743 to 98634778 35 + TSS region transcription start site region 132955
Tssr132956 15 98634789 to 98634809 20 + TSS region transcription start site region 132956
Tssr132957 15 98634987 to 98635075 88 + TSS region transcription start site region 132957
Tssr132958 15 98644052 to 98644086 34 + TSS region transcription start site region 132958
Tssr136262 15 98645245 to 98645249 4 - TSS region transcription start site region 136262
Ddx23 15 98645379 to 98662933 17554 - protein coding gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Cpgi7662 15 98662451 to 98663135 684 CpG island CpG island 7662
Tssr136263 15 98662871 to 98662911 40 - TSS region transcription start site region 136263
Rnd1 15 98669205 to 98677461 8256 - protein coding gene Rho family GTPase 1
Cpgi7663 15 98676985 to 98677611 626 CpG island CpG island 7663
Tssr136264 15 98677451 to 98677467 16 - TSS region transcription start site region 136264
Gm34152 15 98691863 to 98696191 4328 - lincRNA gene predicted gene, 34152
Cpgi7664 15 98699473 to 98699993 520 CpG island CpG island 7664
Cpgi7665 15 98708091 to 98708257 166 CpG island CpG island 7665
Tssr132959 15 98708187 to 98708216 29 + TSS region transcription start site region 132959
Tssr132960 15 98708225 to 98708247 22 + TSS region transcription start site region 132960
Ccdc65 15 98708227 to 98723336 15109 + protein coding gene coiled-coil domain containing 65
Cpgi7666 15 98720729 to 98720905 176 CpG island CpG island 7666
Fkbp11 15 98724366 to 98728198 3832 - protein coding gene FK506 binding protein 11
Tssr136265 15 98727439 to 98727443 4 - TSS region transcription start site region 136265
Cpgi7667 15 98727493 to 98728200 707 CpG island CpG island 7667
Tssr136266 15 98727496 to 98727527 31 - TSS region transcription start site region 136266
Tssr136267 15 98727530 to 98727551 21 - TSS region transcription start site region 136267
Tssr136268 15 98727555 to 98727609 54 - TSS region transcription start site region 136268
Tssr136269 15 98728028 to 98728033 5 - TSS region transcription start site region 136269
Tssr136270 15 98728106 to 98728117 11 - TSS region transcription start site region 136270
Tssr136271 15 98728120 to 98728187 67 - TSS region transcription start site region 136271
Arf3 15 98737624 to 98763118 25494 - protein coding gene ADP-ribosylation factor 3
Tssr132961 15 98738417 to 98738443 26 + TSS region transcription start site region 132961
Tssr136272 15 98738718 to 98738785 67 - TSS region transcription start site region 136272
Tssr136273 15 98740154 to 98740184 30 - TSS region transcription start site region 136273
Tssr136274 15 98740240 to 98740351 111 - TSS region transcription start site region 136274
Tssr132962 15 98740252 to 98740312 60 + TSS region transcription start site region 132962
Tssr136275 15 98740366 to 98740414 48 - TSS region transcription start site region 136275
Tssr136276 15 98741375 to 98741387 12 - TSS region transcription start site region 136276
Tssr136277 15 98742611 to 98742625 14 - TSS region transcription start site region 136277
Tssr136278 15 98742645 to 98742661 16 - TSS region transcription start site region 136278
Tssr136279 15 98755067 to 98755106 39 - TSS region transcription start site region 136279
5830427D03Rik 15 98760136 to 98762051 1915 unclassified gene RIKEN cDNA 5830427D03 gene
Cpgi7668 15 98762253 to 98763587 1334 CpG island CpG island 7668