Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:96997117-97327278

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc38a4 15 96994823 to 97055956 61133 - protein coding gene solute carrier family 38, member 4
Tssr136081 15 97008682 to 97008688 6 - TSS region transcription start site region 136081
Tssr136082 15 97008700 to 97008716 16 - TSS region transcription start site region 136082
Tssr136083 15 97008725 to 97008744 19 - TSS region transcription start site region 136083
Tssr136084 15 97008897 to 97008908 11 - TSS region transcription start site region 136084
Tssr136085 15 97008986 to 97009007 21 - TSS region transcription start site region 136085
Tssr136086 15 97010140 to 97010160 20 - TSS region transcription start site region 136086
Tssr136087 15 97010189 to 97010201 12 - TSS region transcription start site region 136087
Imrfq2 15 97011059 to 97011157 98 QTL immune response to Factor IX QTL 2
D15Mit161 15 97011059 to 97011157 98 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 161
D15Mit161.1 15 97011163 to 97011289 126 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 161.1
Tssr136088 15 97013475 to 97013495 20 - TSS region transcription start site region 136088
Tssr136089 15 97013564 to 97013575 11 - TSS region transcription start site region 136089
Tssr136090 15 97013585 to 97013608 23 - TSS region transcription start site region 136090
Tssr136091 15 97013681 to 97013687 6 - TSS region transcription start site region 136091
Tssr136092 15 97019470 to 97019482 12 - TSS region transcription start site region 136092
Tssr136093 15 97019527 to 97019538 11 - TSS region transcription start site region 136093
Tssr136094 15 97019840 to 97019847 7 - TSS region transcription start site region 136094
Tssr136095 15 97019878 to 97019883 5 - TSS region transcription start site region 136095
Tssr136096 15 97019891 to 97019902 11 - TSS region transcription start site region 136096
Tssr136097 15 97019924 to 97019937 13 - TSS region transcription start site region 136097
Tssr136098 15 97019940 to 97019972 32 - TSS region transcription start site region 136098
Tssr136099 15 97020079 to 97020086 7 - TSS region transcription start site region 136099
Tssr136100 15 97020323 to 97020336 13 - TSS region transcription start site region 136100
Tssr136101 15 97020343 to 97020358 15 - TSS region transcription start site region 136101
Tssr136102 15 97029274 to 97029277 3 - TSS region transcription start site region 136102
Tssr136103 15 97031205 to 97031221 16 - TSS region transcription start site region 136103
Gm32840 15 97039238 to 97106904 67666 + lncRNA gene predicted gene, 32840
Tssr132850 15 97044171 to 97044189 18 + TSS region transcription start site region 132850
Tssr136104 15 97050083 to 97050099 16 - TSS region transcription start site region 136104
Cpgi7612 15 97054392 to 97055199 807 CpG island CpG island 7612
Tssr136105 15 97055886 to 97055907 21 - TSS region transcription start site region 136105
Tssr136106 15 97055942 to 97055964 22 - TSS region transcription start site region 136106
Gm32789 15 97067187 to 97069320 2133 + lncRNA gene predicted gene, 32789
Gm32733 15 97102525 to 97107514 4989 - lncRNA gene predicted gene, 32733
Gm32885 15 97157117 to 97167278 10161 - lincRNA gene predicted gene, 32885
Gm33149 15 97162092 to 97173903 11811 + lncRNA gene predicted gene, 33149
Tssr136107 15 97167231 to 97167250 19 - TSS region transcription start site region 136107
Tssr136108 15 97167260 to 97167267 7 - TSS region transcription start site region 136108
Cpgi7613 15 97173383 to 97173621 238 CpG island CpG island 7613
Gm33253 15 97183012 to 97191329 8317 + lncRNA gene predicted gene, 33253
Gm33205 15 97187415 to 97203772 16357 - lncRNA gene predicted gene, 33205
D15Mit218 15 97234186 to 97234292 106 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 218
Cpgi7614 15 97235689 to 97235862 173 CpG island CpG island 7614
Amigo2 15 97244125 to 97247287 3162 - protein coding gene adhesion molecule with Ig like domain 2
Cpgi7615 15 97245213 to 97245591 378 CpG island CpG island 7615
Tssr132851 15 97245677 to 97245686 9 + TSS region transcription start site region 132851
Cpgi7616 15 97246172 to 97248059 1887 CpG island CpG island 7616
Tssr132852 15 97246958 to 97247004 46 + TSS region transcription start site region 132852
Tssr132853 15 97247011 to 97247052 41 + TSS region transcription start site region 132853
Pced1b 15 97247107 to 97385680 138573 + protein coding gene PC-esterase domain containing 1B
Tssr136109 15 97247242 to 97247257 15 - TSS region transcription start site region 136109
Tssr136110 15 97247306 to 97247315 9 - TSS region transcription start site region 136110
Tssr132854 15 97247391 to 97247448 57 + TSS region transcription start site region 132854
Cpgi7617 15 97253704 to 97254086 382 CpG island CpG island 7617
Gm4383 15 97302352 to 97302974 622 - pseudogene predicted gene 4383
Cpgi7618 15 97323422 to 97324041 619 CpG island CpG island 7618