Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:89083307-89168700

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trabd 15 89076052 to 89087075 11023 + protein coding gene TraB domain containing
Cpgi7526 15 89088750 to 89090043 1293 CpG island CpG island 7526
Tssr132641 15 89089073 to 89089111 38 + TSS region transcription start site region 132641
Selenoo 15 89089107 to 89100340 11233 + protein coding gene selenoprotein O
Tubgcp6 15 89099097 to 89123208 24111 - protein coding gene tubulin, gamma complex associated protein 6
Tssr132642 15 89099254 to 89099266 12 + TSS region transcription start site region 132642
Tssr135837 15 89106167 to 89106178 11 - TSS region transcription start site region 135837
Cpgi7527 15 89122496 to 89123747 1251 CpG island CpG island 7527
Tssr135838 15 89123111 to 89123173 62 - TSS region transcription start site region 135838
Hdac10 15 89123307 to 89128700 5393 - protein coding gene histone deacetylase 10
Cpgi7528 15 89128236 to 89129003 767 CpG island CpG island 7528
Tssr135839 15 89128634 to 89128693 59 - TSS region transcription start site region 135839
Gm46530 15 89128727 to 89133139 4412 + lncRNA gene predicted gene, 46530
Mapk12 15 89130584 to 89140703 10119 - protein coding gene mitogen-activated protein kinase 12
Tssr135840 15 89137582 to 89137600 18 - TSS region transcription start site region 135840
Cpgi7529 15 89139989 to 89140911 922 CpG island CpG island 7529
Tssr135841 15 89140664 to 89140696 32 - TSS region transcription start site region 135841
Mapk11 15 89142482 to 89149606 7124 - protein coding gene mitogen-activated protein kinase 11
D15Jmp9 15 89143520 to 89143653 133 DNA segment DNA segment, Chr 15, Jackson Laboratory Mapping Panels 9
Cpgi7530 15 89145988 to 89147249 1261 CpG island CpG island 7530
Tssr135842 15 89147028 to 89147064 36 - TSS region transcription start site region 135842
Tssr135843 15 89147149 to 89147195 46 - TSS region transcription start site region 135843
Cpgi7531 15 89149099 to 89150054 955 CpG island CpG island 7531
Tssr135844 15 89149557 to 89149650 93 - TSS region transcription start site region 135844
Plxnb2 15 89155549 to 89180788 25239 - protein coding gene plexin B2
Cpgi7532 15 89160197 to 89161095 898 CpG island CpG island 7532
Mir7118 15 89162848 to 89162908 60 - miRNA gene microRNA 7118
Tssr135845 15 89167402 to 89167446 44 - TSS region transcription start site region 135845