Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:83895339-84165675

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efcab6 15 83866712 to 84065379 198667 - protein coding gene EF-hand calcium binding domain 6
Tssr135694 15 83919364 to 83919387 23 - TSS region transcription start site region 135694
Tssr135695 15 83919392 to 83919399 7 - TSS region transcription start site region 135695
Tssr135696 15 83920171 to 83920189 18 - TSS region transcription start site region 135696
Tssr135697 15 83936074 to 83936081 7 - TSS region transcription start site region 135697
Tssr135698 15 83936082 to 83936104 22 - TSS region transcription start site region 135698
Cpgi7454 15 83998113 to 83998495 382 CpG island CpG island 7454
Rpl31-ps22 15 84030339 to 84030675 336 + pseudogene ribosomal protein L31, pseudogene 22
Tssr135699 15 84055071 to 84055099 28 - TSS region transcription start site region 135699
Tssr135700 15 84055103 to 84055110 7 - TSS region transcription start site region 135700
4933433M23Rik 15 84055207 to 84056590 1383 unclassified gene RIKEN cDNA 4933433M23 gene
Cpgi7455 15 84064939 to 84065475 536 CpG island CpG island 7455
Tssr135701 15 84065329 to 84065364 35 - TSS region transcription start site region 135701
Sult4a1 15 84076097 to 84105754 29657 - protein coding gene sulfotransferase family 4A, member 1
Tssr135702 15 84090643 to 84090672 29 - TSS region transcription start site region 135702
Cpgi7456 15 84104668 to 84106139 1471 CpG island CpG island 7456
Tssr135703 15 84105599 to 84105658 59 - TSS region transcription start site region 135703
Tssr135704 15 84105662 to 84105674 12 - TSS region transcription start site region 135704
Gm46526 15 84106658 to 84108851 2193 + lincRNA gene predicted gene, 46526
Pnpla5 15 84112356 to 84123175 10819 - protein coding gene patatin-like phospholipase domain containing 5
Tssr132441 15 84123116 to 84123117 1 + TSS region transcription start site region 132441
Tssr135705 15 84123174 to 84123203 29 - TSS region transcription start site region 135705
Gm33432 15 84127278 to 84133211 5933 + lincRNA gene predicted gene, 33432
Tssr132442 15 84127300 to 84127320 20 + TSS region transcription start site region 132442
Tssr132443 15 84127323 to 84127334 11 + TSS region transcription start site region 132443
Tssr132444 15 84127357 to 84127366 9 + TSS region transcription start site region 132444
Tssr135706 15 84132035 to 84132040 5 - TSS region transcription start site region 135706
Tssr135707 15 84132063 to 84132077 14 - TSS region transcription start site region 135707
Gm33530 15 84164859 to 84165830 971 - lncRNA gene predicted gene, 33530