Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:82325044-82789413

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98 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Naga 15 82329532 to 82338852 9320 - protein coding gene N-acetyl galactosaminidase, alpha
Tssr135541 15 82332447 to 82332472 25 - TSS region transcription start site region 135541
Tssr135542 15 82337009 to 82337020 11 - TSS region transcription start site region 135542
Cpgi7419 15 82338651 to 82339331 680 CpG island CpG island 7419
Tssr135543 15 82338770 to 82338791 21 - TSS region transcription start site region 135543
Tssr135544 15 82338801 to 82338854 53 - TSS region transcription start site region 135544
Tssr135545 15 82338857 to 82338864 7 - TSS region transcription start site region 135545
Tssr4669 15 82338864 to 82338875 11 - TSS region transcription start site region 4669
Pheta2 15 82338947 to 82345710 6763 + protein coding gene PH domain containing endocytic trafficking adaptor 2
Cpgi7420 15 82340741 to 82341502 761 CpG island CpG island 7420
Tssr132381 15 82341199 to 82341213 14 + TSS region transcription start site region 132381
n-R5s41 15 82342653 to 82342771 118 + rRNA gene nuclear encoded rRNA 5S 41
Tssr132382 15 82343103 to 82343106 3 + TSS region transcription start site region 132382
Cpgi7421 15 82345784 to 82346543 759 CpG island CpG island 7421
Tssr132383 15 82346008 to 82346035 27 + TSS region transcription start site region 132383
Tssr132384 15 82346042 to 82346088 46 + TSS region transcription start site region 132384
Smdt1 15 82346046 to 82349062 3016 + protein coding gene single-pass membrane protein with aspartate rich tail 1
Tssr132385 15 82346117 to 82346122 5 + TSS region transcription start site region 132385
Ndufa6 15 82350139 to 82354291 4152 - protein coding gene NADH:ubiquinone oxidoreductase subunit A6
Tssr132386 15 82351770 to 82351774 4 + TSS region transcription start site region 132386
Cpgi7422 15 82353881 to 82354843 962 CpG island CpG island 7422
Tssr135546 15 82354194 to 82354208 14 - TSS region transcription start site region 135546
Tssr135547 15 82354225 to 82354261 36 - TSS region transcription start site region 135547
Tssr135548 15 82354280 to 82354291 11 - TSS region transcription start site region 135548
Tssr135549 15 82354312 to 82354323 11 - TSS region transcription start site region 135549
Tssr132387 15 82354394 to 82354445 51 + TSS region transcription start site region 132387
Tssr132388 15 82354477 to 82354508 31 + TSS region transcription start site region 132388
Tssr132389 15 82358290 to 82358294 4 + TSS region transcription start site region 132389
Tssr132390 15 82358544 to 82358584 40 + TSS region transcription start site region 132390
Tssr132391 15 82358585 to 82358597 12 + TSS region transcription start site region 132391
Tssr132392 15 82362910 to 82362913 3 + TSS region transcription start site region 132392
Cyp2d22 15 82370527 to 82380260 9733 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 22
Tssr135550 15 82371936 to 82371961 25 - TSS region transcription start site region 135550
Tssr132393 15 82377187 to 82377191 4 + TSS region transcription start site region 132393
Tssr132394 15 82379375 to 82379421 46 + TSS region transcription start site region 132394
Tssr135551 15 82380140 to 82380150 10 - TSS region transcription start site region 135551
Tssr135552 15 82380179 to 82380263 84 - TSS region transcription start site region 135552
Tssr135553 15 82380272 to 82380281 9 - TSS region transcription start site region 135553
Cyp2d11 15 82389154 to 82394022 4868 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 11
Mir7684 15 82393919 to 82393978 59 - miRNA gene microRNA 7684
Cyp2d10 15 82402846 to 82407195 4349 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 10
Tssr135554 15 82403331 to 82403337 6 - TSS region transcription start site region 135554
Tssr135555 15 82404535 to 82404545 10 - TSS region transcription start site region 135555
Gm27331 15 82407094 to 82407153 59 - miRNA gene predicted gene, 27331
Tssr135556 15 82407187 to 82407203 16 - TSS region transcription start site region 135556
Gm25990 15 82408458 to 82408543 85 + miRNA gene predicted gene, 25990
Gm19267 15 82421451 to 82423447 1996 - pseudogene predicted gene, 19267
Gm46501 15 82433527 to 82436575 3048 + pseudogene predicted gene, 46501
Gm49421 15 82443480 to 82444651 1171 + pseudogene predicted gene, 49421
Gm49419 15 82449484 to 82449736 252 - pseudogene predicted gene, 49419
Tssr132395 15 82452372 to 82452385 13 + TSS region transcription start site region 132395
Cyp2d9 15 82452377 to 82456827 4450 + protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 9
Drb7 15 82452377 to 82456827 4450 QTL dopamine receptor binding 7
Gm27622 15 82452421 to 82452480 59 + miRNA gene predicted gene, 27622
Tssr132396 15 82452544 to 82452558 14 + TSS region transcription start site region 132396
Tssr132397 15 82454118 to 82454157 39 + TSS region transcription start site region 132397
Tssr132398 15 82456336 to 82456348 12 + TSS region transcription start site region 132398
Tssr135557 15 82456383 to 82456400 17 - TSS region transcription start site region 135557
Cyp2d32-ps 15 82462621 to 82465111 2490 + pseudogene cytochrome P450, family 2, subfamily d, polypeptide 32, pseudogene
Gm27825 15 82504627 to 82511372 6745 + pseudogene predicted gene, 27825
Tssr4670 15 82508562 to 82508570 8 + TSS region transcription start site region 4670
Tdg-ps 15 82516295 to 82519242 2947 + pseudogene thymine DNA glycosylase, pseudogene
Gm46525 15 82519913 to 82520227 314 - pseudogene predicted gene, 46525
Gm46524 15 82538289 to 82538602 313 + pseudogene predicted gene, 46524
Gm28023 15 82544020 to 82548652 4632 - pseudogene predicted gene, 28023
Cyp2d12 15 82555044 to 82559413 4369 + protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 12
Tssr132399 15 82555087 to 82555091 4 + TSS region transcription start site region 132399
Gm27924 15 82555116 to 82555175 59 + miRNA gene predicted gene, 27924
Cyp2d33-ps 15 82562197 to 82565518 3321 + pseudogene cytochrome P450, family 2, subfamily d, polypeptide 33, pseudogene
Gm49429 15 82563436 to 82565311 1875 - unclassified gene predicted gene, 49429
Cyp2d34-ps 15 82608921 to 82612895 3974 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 34, pseudogene
Gm27742 15 82612887 to 82612946 59 - miRNA gene predicted gene, 27742
Cyp2d34 15 82615965 to 82620946 4981 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 34
Tssr135558 15 82620931 to 82620947 16 - TSS region transcription start site region 135558
Gm49431 15 82621092 to 82660905 39813 + antisense lncRNA gene predicted gene, 49431
Cyp2d13 15 82636750 to 82642045 5295 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 13
D15Mit189 15 82641175 to 82641298 123 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 189
Brm2 15 82641175 to 82641298 123 QTL brachyury modifier 2
Gm27463 15 82641945 to 82642001 56 - miRNA gene predicted gene, 27463
Tssr135559 15 82642035 to 82642052 17 - TSS region transcription start site region 135559
Tssr132400 15 82642151 to 82642168 17 + TSS region transcription start site region 132400
Tssr132401 15 82642181 to 82642194 13 + TSS region transcription start site region 132401
Cyp2d35-ps 15 82649917 to 82654711 4794 - pseudogene cytochrome P450, family 2, subfamily d, member 35, pseudogene
Tssr4671 15 82662298 to 82662302 4 - TSS region transcription start site region 4671
Cyp2d36-ps 15 82671288 to 82683257 11969 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 36, pseudogene
Tssr135560 15 82687694 to 82687699 5 - TSS region transcription start site region 135560
Cyp2d37-ps 15 82688750 to 82690058 1308 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 37, pseudogene
Tssr135561 15 82693062 to 82693082 20 - TSS region transcription start site region 135561
Tssr135562 15 82693091 to 82693114 23 - TSS region transcription start site region 135562
Cyp2d38-ps 15 82705575 to 82707270 1695 - pseudogene cytochrome P450, family 2, subfamily d, member 38, pseudogene
Tssr135563 15 82707356 to 82707375 19 - TSS region transcription start site region 135563
Cyp2d39-ps 15 82716007 to 82719416 3409 - pseudogene cytochrome P450, family 2, subfamily d, polypeptide 39, pseudogene
Gm49433 15 82741807 to 82742116 309 - pseudogene predicted gene, 49433
Cyp2d40 15 82759833 to 82764122 4289 - protein coding gene cytochrome P450, family 2, subfamily d, polypeptide 40
Tssr135564 15 82764176 to 82764192 16 - TSS region transcription start site region 135564
Cyp2d41-ps 15 82777931 to 82782110 4179 - pseudogene cytochrome P450, family 2, subfamily d, member 41, pseudogene
Gm27618 15 82782082 to 82782141 59 - miRNA gene predicted gene, 27618
Tssr135565 15 82782179 to 82782184 5 - TSS region transcription start site region 135565