Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:81419166-81609356

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Xpnpep3 15 81400132 to 81457476 57344 + protein coding gene X-prolyl aminopeptidase 3, mitochondrial
Gm17025 15 81415560 to 81419188 3628 - antisense lncRNA gene predicted gene 17025
Tssr135480 15 81421473 to 81421496 23 - TSS region transcription start site region 135480
Tssr135481 15 81421678 to 81421690 12 - TSS region transcription start site region 135481
Cpgi7386 15 81465807 to 81466984 1177 CpG island CpG island 7386
Tssr135482 15 81466043 to 81466057 14 - TSS region transcription start site region 135482
Tssr132266 15 81466309 to 81466322 13 + TSS region transcription start site region 132266
Rbx1 15 81466316 to 81476369 10053 + protein coding gene ring-box 1
Tssr132267 15 81466339 to 81466365 26 + TSS region transcription start site region 132267
Tssr132268 15 81466665 to 81466711 46 + TSS region transcription start site region 132268
Cpgi7387 15 81481259 to 81481453 194 CpG island CpG island 7387
Gm49406 15 81485972 to 81486381 409 - pseudogene predicted gene, 49406
Gm5218 15 81499081 to 81499545 464 - pseudogene predicted gene 5218
Cpgi7388 15 81514166 to 81514356 190 CpG island CpG island 7388
Tssr135483 15 81514260 to 81514281 21 - TSS region transcription start site region 135483
Tssr4662 15 81522093 to 81522104 11 - TSS region transcription start site region 4662
Cpgi7389 15 81522225 to 81523537 1312 CpG island CpG island 7389
Tssr132269 15 81522338 to 81522391 53 + TSS region transcription start site region 132269
Tssr135484 15 81522921 to 81522933 12 - TSS region transcription start site region 135484
Tssr135485 15 81522940 to 81522960 20 - TSS region transcription start site region 135485
Tssr135486 15 81523261 to 81523312 51 - TSS region transcription start site region 135486
Tssr132270 15 81523366 to 81523377 11 + TSS region transcription start site region 132270
Tssr132271 15 81523388 to 81523446 58 + TSS region transcription start site region 132271
Tssr132272 15 81523832 to 81523871 39 + TSS region transcription start site region 132272
Tssr135487 15 81528654 to 81528665 11 - TSS region transcription start site region 135487
1110025M09Rik 15 81584174 to 81585028 854 - unclassified gene RIKEN cDNA 1110025M09 gene
Cpgi7390 15 81584969 to 81586806 1837 CpG island CpG island 7390
Tssr132273 15 81585338 to 81585381 43 + TSS region transcription start site region 132273
Tssr132274 15 81585459 to 81585508 49 + TSS region transcription start site region 132274
Tssr135488 15 81586032 to 81586045 13 - TSS region transcription start site region 135488
Tssr135489 15 81586051 to 81586078 27 - TSS region transcription start site region 135489
Gm23880 15 81586133 to 81586186 53 + miRNA gene predicted gene, 23880
Tssr132275 15 81586206 to 81586250 44 + TSS region transcription start site region 132275
Ep300 15 81586214 to 81652077 65863 + protein coding gene E1A binding protein p300
Tssr135490 15 81586300 to 81586367 67 - TSS region transcription start site region 135490
Tssr135491 15 81586368 to 81586386 18 - TSS region transcription start site region 135491
Tssr132276 15 81586411 to 81586512 101 + TSS region transcription start site region 132276
Tssr135492 15 81586470 to 81586496 26 - TSS region transcription start site region 135492
Tssr132277 15 81586597 to 81586609 12 + TSS region transcription start site region 132277
Tssr132278 15 81588950 to 81588958 8 + TSS region transcription start site region 132278
Gm22067 15 81592093 to 81592199 106 + snRNA gene predicted gene, 22067
Tssr132279 15 81608083 to 81608088 5 + TSS region transcription start site region 132279