Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:81336043-81596057

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Slc25a17 15 81318921 to 81360765 41844 - protein coding gene solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17
Cpgi7384 15 81360520 to 81361005 485 CpG island CpG island 7384
Tssr135463 15 81360739 to 81360816 77 - TSS region transcription start site region 135463
Tssr135464 15 81360831 to 81360853 22 - TSS region transcription start site region 135464
Tssr135465 15 81364811 to 81364815 4 - TSS region transcription start site region 135465
St13 15 81365044 to 81399694 34650 - protein coding gene suppression of tumorigenicity 13
Tssr135466 15 81365333 to 81365362 29 - TSS region transcription start site region 135466
Tssr135467 15 81374873 to 81374896 23 - TSS region transcription start site region 135467
Tssr135468 15 81380731 to 81380742 11 - TSS region transcription start site region 135468
Tssr135469 15 81392311 to 81392316 5 - TSS region transcription start site region 135469
Tssr135470 15 81398296 to 81398299 3 - TSS region transcription start site region 135470
Cpgi7385 15 81399322 to 81400311 989 CpG island CpG island 7385
Tssr135471 15 81399596 to 81399652 56 - TSS region transcription start site region 135471
Tssr135472 15 81399656 to 81399732 76 - TSS region transcription start site region 135472
Tssr135473 15 81399750 to 81399759 9 - TSS region transcription start site region 135473
Tssr135474 15 81399780 to 81399791 11 - TSS region transcription start site region 135474
Tssr135475 15 81399795 to 81399832 37 - TSS region transcription start site region 135475
Tssr135476 15 81400053 to 81400093 40 - TSS region transcription start site region 135476
Xpnpep3 15 81400132 to 81457476 57344 + protein coding gene X-prolyl aminopeptidase 3, mitochondrial
Tssr132265 15 81400132 to 81400215 83 + TSS region transcription start site region 132265
Dnajb7 15 81407088 to 81408273 1185 - protein coding gene DnaJ heat shock protein family (Hsp40) member B7
Tssr135477 15 81408252 to 81408257 5 - TSS region transcription start site region 135477
Tssr135478 15 81408261 to 81408273 12 - TSS region transcription start site region 135478
Tssr135479 15 81408281 to 81408301 20 - TSS region transcription start site region 135479
Gm17025 15 81415560 to 81419188 3628 - antisense lncRNA gene predicted gene 17025
Tssr135480 15 81421473 to 81421496 23 - TSS region transcription start site region 135480
Tssr135481 15 81421678 to 81421690 12 - TSS region transcription start site region 135481
Cpgi7386 15 81465807 to 81466984 1177 CpG island CpG island 7386
Tssr135482 15 81466043 to 81466057 14 - TSS region transcription start site region 135482
Tssr132266 15 81466309 to 81466322 13 + TSS region transcription start site region 132266
Rbx1 15 81466316 to 81476369 10053 + protein coding gene ring-box 1
Tssr132267 15 81466339 to 81466365 26 + TSS region transcription start site region 132267
Tssr132268 15 81466665 to 81466711 46 + TSS region transcription start site region 132268
Cpgi7387 15 81481259 to 81481453 194 CpG island CpG island 7387
Gm49406 15 81485972 to 81486381 409 - pseudogene predicted gene, 49406
Gm5218 15 81499081 to 81499545 464 - pseudogene predicted gene 5218
Cpgi7388 15 81514166 to 81514356 190 CpG island CpG island 7388
Tssr135483 15 81514260 to 81514281 21 - TSS region transcription start site region 135483
Tssr4662 15 81522093 to 81522104 11 - TSS region transcription start site region 4662
Cpgi7389 15 81522225 to 81523537 1312 CpG island CpG island 7389
Tssr132269 15 81522338 to 81522391 53 + TSS region transcription start site region 132269
Tssr135484 15 81522921 to 81522933 12 - TSS region transcription start site region 135484
Tssr135485 15 81522940 to 81522960 20 - TSS region transcription start site region 135485
Tssr135486 15 81523261 to 81523312 51 - TSS region transcription start site region 135486
Tssr132270 15 81523366 to 81523377 11 + TSS region transcription start site region 132270
Tssr132271 15 81523388 to 81523446 58 + TSS region transcription start site region 132271
Tssr132272 15 81523832 to 81523871 39 + TSS region transcription start site region 132272
Tssr135487 15 81528654 to 81528665 11 - TSS region transcription start site region 135487
1110025M09Rik 15 81584174 to 81585028 854 - unclassified gene RIKEN cDNA 1110025M09 gene
Cpgi7390 15 81584969 to 81586806 1837 CpG island CpG island 7390
Tssr132273 15 81585338 to 81585381 43 + TSS region transcription start site region 132273
Tssr132274 15 81585459 to 81585508 49 + TSS region transcription start site region 132274
Tssr135488 15 81586032 to 81586045 13 - TSS region transcription start site region 135488
Tssr135489 15 81586051 to 81586078 27 - TSS region transcription start site region 135489
Gm23880 15 81586133 to 81586186 53 + miRNA gene predicted gene, 23880
Tssr132275 15 81586206 to 81586250 44 + TSS region transcription start site region 132275
Ep300 15 81586214 to 81652077 65863 + protein coding gene E1A binding protein p300
Tssr135490 15 81586300 to 81586367 67 - TSS region transcription start site region 135490
Tssr135491 15 81586368 to 81586386 18 - TSS region transcription start site region 135491
Tssr132276 15 81586411 to 81586512 101 + TSS region transcription start site region 132276
Tssr135492 15 81586470 to 81586496 26 - TSS region transcription start site region 135492
Tssr132277 15 81586597 to 81586609 12 + TSS region transcription start site region 132277
Tssr132278 15 81588950 to 81588958 8 + TSS region transcription start site region 132278
Gm22067 15 81592093 to 81592199 106 + snRNA gene predicted gene, 22067