Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:80827505-81077899

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tnrc6b 15 80711313 to 80941085 229772 + protein coding gene trinucleotide repeat containing 6b
D230044B12Rik 15 80831579 to 80833212 1633 unclassified gene RIKEN cDNA D230044B12 gene
Cpgi7378 15 80876292 to 80876623 331 CpG island CpG island 7378
B130063F10Rik 15 80890293 to 80893149 2856 unclassified gene RIKEN cDNA B130063F10 gene
D15Mit69 15 80896284 to 80896417 133 DNA segment DNA segment, Chr 15, Massachusetts Institute of Technology 69
Tssr135447 15 80896888 to 80896902 14 - TSS region transcription start site region 135447
Tssr132247 15 80897193 to 80897198 5 + TSS region transcription start site region 132247
Tssr132248 15 80902392 to 80902407 15 + TSS region transcription start site region 132248
Tssr132249 15 80930517 to 80930527 10 + TSS region transcription start site region 132249
Tssr132250 15 80930531 to 80930554 23 + TSS region transcription start site region 132250
Tssr132251 15 80931288 to 80931322 34 + TSS region transcription start site region 132251
Tssr132252 15 80937122 to 80937147 25 + TSS region transcription start site region 132252
Mir5113 15 80940039 to 80940120 81 + miRNA gene microRNA 5113
Cpgi7379 15 80948115 to 80948987 872 CpG island CpG island 7379
Tssr132253 15 80948484 to 80948549 65 + TSS region transcription start site region 132253
Adsl 15 80948490 to 80970946 22456 + protein coding gene adenylosuccinate lyase
Tssr132254 15 80952472 to 80952480 8 + TSS region transcription start site region 132254
Gm6612 15 80952505 to 80952899 394 + pseudogene predicted gene 6612
Cpgi7380 15 80977545 to 80978367 822 CpG island CpG island 7380
Tssr132255 15 80977608 to 80977619 11 + TSS region transcription start site region 132255
Sgsm3 15 80977765 to 81012290 34525 + protein coding gene small G protein signaling modulator 3
Tssr132256 15 80977780 to 80977845 65 + TSS region transcription start site region 132256
Tssr132257 15 80977873 to 80977876 3 + TSS region transcription start site region 132257
Gm31462 15 81005407 to 81006410 1003 - antisense lncRNA gene predicted gene, 31462
Mrtfa 15 81012281 to 81190757 178476 - protein coding gene myocardin related transcription factor A
Tssr135448 15 81018077 to 81018117 40 - TSS region transcription start site region 135448
Tssr132258 15 81039639 to 81039646 7 + TSS region transcription start site region 132258
Gm25131 15 81039643 to 81039793 150 + snRNA gene predicted gene, 25131
Tssr132259 15 81044689 to 81044700 11 + TSS region transcription start site region 132259
Tssr135449 15 81045451 to 81045465 14 - TSS region transcription start site region 135449
Tssr135450 15 81045467 to 81045540 73 - TSS region transcription start site region 135450
Tssr135451 15 81067009 to 81067020 11 - TSS region transcription start site region 135451
Tssr135452 15 81067022 to 81067037 15 - TSS region transcription start site region 135452
Tssr135453 15 81070943 to 81070948 5 - TSS region transcription start site region 135453