Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 15:79603889-79713933

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dmc1 15 79561497 to 79605109 43612 - protein coding gene DNA meiotic recombinase 1
Cpgi7341 15 79604483 to 79605472 989 CpG island CpG island 7341
Tssr135360 15 79605086 to 79605114 28 - TSS region transcription start site region 135360
Fam227a 15 79609576 to 79658956 49380 - protein coding gene family with sequence similarity 227, member A
Tssr135361 15 79620761 to 79620780 19 - TSS region transcription start site region 135361
Cpgi7342 15 79658560 to 79659468 908 CpG island CpG island 7342
Tssr135362 15 79658789 to 79658798 9 - TSS region transcription start site region 135362
Tssr135363 15 79658854 to 79658888 34 - TSS region transcription start site region 135363
Tssr135364 15 79658889 to 79658933 44 - TSS region transcription start site region 135364
Tssr132103 15 79659188 to 79659194 6 + TSS region transcription start site region 132103
Tssr132104 15 79659196 to 79659267 71 + TSS region transcription start site region 132104
Cby1 15 79659199 to 79667660 8461 + protein coding gene chibby family member 1, beta catenin antagonist
Gm30877 15 79665768 to 79666993 1225 - lncRNA gene predicted gene, 30877
Tssr132105 15 79668541 to 79668546 5 + TSS region transcription start site region 132105
Cpgi7343 15 79670653 to 79671439 786 CpG island CpG island 7343
Tssr132106 15 79670856 to 79670888 32 + TSS region transcription start site region 132106
Tomm22 15 79670868 to 79672862 1994 + protein coding gene translocase of outer mitochondrial membrane 22
Tssr132107 15 79671073 to 79671133 60 + TSS region transcription start site region 132107
Tssr132108 15 79671136 to 79671148 12 + TSS region transcription start site region 132108
Josd1 15 79674250 to 79687872 13622 - protein coding gene Josephin domain containing 1
Gm49520 15 79681102 to 79681322 220 - pseudogene predicted gene, 49520
Cpgi7344 15 79686841 to 79688236 1395 CpG island CpG island 7344
Tssr135365 15 79687744 to 79687756 12 - TSS region transcription start site region 135365
Tssr135366 15 79687776 to 79687894 118 - TSS region transcription start site region 135366
Tssr132109 15 79687927 to 79687949 22 + TSS region transcription start site region 132109
Tssr132110 15 79687966 to 79687993 27 + TSS region transcription start site region 132110
Tssr132111 15 79687996 to 79688013 17 + TSS region transcription start site region 132111
Gm26884 15 79689140 to 79692385 3245 - lincRNA gene predicted gene, 26884
Cpgi7345 15 79690287 to 79691787 1500 CpG island CpG island 7345
Tssr132112 15 79690869 to 79690905 36 + TSS region transcription start site region 132112
Gtpbp1 15 79690896 to 79721479 30583 + protein coding gene GTP binding protein 1
Tssr132113 15 79690921 to 79690924 3 + TSS region transcription start site region 132113
n-R5s40 15 79692502 to 79692625 123 + rRNA gene nuclear encoded rRNA 5S 40
Tssr132114 15 79693950 to 79693971 21 + TSS region transcription start site region 132114
Cpgi7346 15 79706988 to 79707146 158 CpG island CpG island 7346